1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
AAACCAGATTATGGTCGCTGTGTTGCTATTGTAGCATCTGCTTCGTTAAGAGAGATGATAAAACCTGGTGCTTTGGCAATCATTTCACCTATTTTAGTGGgtgggttaacttttaattacatgtttgcacatatattatcattaatgaaacctggggagaacggcaacagttaagcaaattttttatgtactgtaaccat...
species | Glycine max |
transcript | GLYMA08G24120.1 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: AGAGATGATAAAACCTGGTGCTTTGGCAATCATTTCACCTATTTTAGTGG GTATTGTGTTCCGTATTTTGGGCTACTATACAGGGCAACCTTTACTTGGGGEST: gi|120529405|gb|EH257539.1|EH257539
genomic: AGAGATGATAAAACCTGGTGCTTTGGCAATCATTTCACCTATTTTAGTGGgtgggttaac ... tcacttgcagGTATTGTGTTCCGTATTTTGGGCTACTATACAGGGCAACCTTTACTTGGGG
EST: AGAGATGATAAAACCTGGTGCTTTGGCAATCATTTCACCTATTTTAGTGG GTATTGTGTTCCGTATTTTGGGCTACTATACAGGGCAACCTTTACTTGGGGEST: gi|6200879|gb|AW152979.1|AW152979
genomic: AGAGATGATAAAACCTGGTGCTTTGGCAATCATTTCACCTATTTTAGTGGgtgggttaac ... tcacttgcagGTATTGTGTTCCGTATTTTGGGCTACTATACAGGGCAACCTTTACTTGGGG
EST: AGAGATGATAAAACCTGGTGCTTTGGCAATCATTTCACCTATTTTAGTGG GTATTGTGTTCCGTATTTTGGGCTACTATACAGGGCAACCTTTACTTGGGGEST: gi|58022340|gb|CX709081.1|CX709081
genomic: AGAGATGATAAAACCTGGTGCTTTGGCAATCATTTCACCTATTTTAGTGGgtgggttaac ... tcacttgcagGTATTGTGTTCCGTATTTTGGGCTACTATACAGGGCAACCTTTACTTGGGG
EST: AGAGATGATAAAACCTGGTGCTTTGGCAATCATTTCACCTATTTTAGTGG GTATTGTGTTCCGTATTTTGGGCTACTATACAGGGCAACCTTTACTTGGGGEST: gi|213597487|gb|DB977794.1|DB977794
genomic: AGAGATGATAAAACCTGGTGCTTTGGCAATCATTTCACCTATTTTAGTGGgtgggttaac ... tcacttgcagGTATTGTGTTCCGTATTTTGGGCTACTATACAGGGCAACCTTTACTTGGGG
EST: CATTTCACCTATTTTAGTGG GTATTGTGTTCCGTATTTTGGGCTACTATACAGGGCAACCTTTACTTGGGG
genomic: CATTTCACCTATTTTAGTGGgtgggttaac ... tcacttgcagGTATTGTGTTCCGTATTTTGGGCTACTATACAGGGCAACCTTTACTTGGGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAACCAGATTATGGTCGCTGTGTTGCTATTGTAGCATCTGCTTCGTTAAGAGAGATGATAAAACCTGGTGCTTTGGCAATCATTTCACCTATTTTAGTGGgtgggttaacttttaattacatgtttgcacatatattatcattaatgaaacctggggagaacggcaacagttaagcaaattttttatgtactgtaaccat
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