1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
TTTCGTGAAGCTGCTAAGCAGAAGGATGATACTGCCATGATGAAGATTATGTCAAATTACGgtatgcagtagtaaactggatccttatagtcttactgattaagtaattccatgcttacagttgtaagatgttacag
species | Glycine max |
transcript | GLYMA08G23740.1 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: TGCTAAGCAGAAGGATGATACTGCCATGATGAAGATTATGTCAAATTACG GTGAGGAAGTAGTTACAGCTTTAGGAAGTGAAGTAGATAGGTTAGAGAAGGEST: gi|21887237|gb|BQ740450.1|BQ740450
genomic: TGCTAAGCAGAAGGATGATACTGCCATGATGAAGATTATGTCAAATTACGgtatgcagta ... gatgttacagGTGAGGAAGTAGTTACAGCTTTAGGAAGTGAAGTAGATAGGTTAGAGAAGG
EST: TGAAGATTATGTCAAATTACG GTGAGGAAGTAGTTACAGCTTTAGGAAGTGAAGTAGATAGGTTAGAGAAGGEST: gi|8402948|gb|BE058582.1|BE058582
genomic: TGAAGATTATGTCAAATTACGgtatgcagta ... gatgttacagGTGAGGAAGTAGTTACAGCTTTAGGAAGTGAAGTAGATAGGTTAGAGAAGG
EST: TGCTAAGCAGAAGGATGATACTGCCATGATGAAGATTATGTCAAATTACG GTGAGGAAGTAGTTACAGCTTTAGGAAGTGAAGTAGATAGGTTAGAGAAGG
genomic: TGCTAAGCAGAAGGATGATACTGCCATGATGAAGATTATGTCAAATTACGgtatgcagta ... gatgttacagGTGAGGAAGTAGTTACAGCTTTAGGAAGTGAAGTAGATAGGTTAGAGAAGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTCGTGAAGCTGCTAAGCAGAAGGATGATACTGCCATGATGAAGATTATGTCAAATTACGgtatgcagtagtaaactggatccttatagtcttactgattaagtaattccatgcttacagttgtaagatgttacag
- - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - TGAAGA