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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TATGCTAAAAAAGATTGGTACTGGATTGGAGCTGCTGCTCTTCTTGGTTTCACAGTTCTGTACAACGTTCTCTTCACCCTTGCGCTTATGTACCTTAACCgtaagagctcttgcatcttgatcaatatttcaagtgacttctttcattttctatcttactaaagcttaattttctctattcttgtttggtgcattag

Basic information

species Glycine max
transcript GLYMA08G21540.2
intron # 12
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA08G21540.2 (Glycine max), 5'ss of exon 12
lower sequence: Vv09s0002g03580.t01 (Vitis vinifera), 5'ss of exon 12
TATGCTAAAAAAGATTGGTACTGGATTGGAGCTGCTGCTCTTCTTGGTTTCACAGTTCTGTACAACGTTCTCTTCACCCTTGCGCTTATGTACCTTAACCgtaagagctcttgcatcttgatcaatatttcaag--tgacttctttcattttctatcttacta---aagcttaattttct----ctat-tcttgtttggtgcattag
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GACTCAGAGAGCTACTGGTACTGGATTGGAGCTGCTTGTCTTTTGGGGTTCACCATTCTCTTCAACATTCTCTTCACCTTCTCGCTTATGTACCTGAATCgtaagttcaaagaatattatatctgtatctgaagattgaatccaggaccttatttgtttagaggataagttttcttttctgatactgtctcttcttctttgaaatag