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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAAGGCCCTATCAAGGGTGAAGTCCATGGCTCAGTATCCAGAGGCACGTGCTCAATACCGGCGTCTGCTAAATGTTGTTGAGGACTTCCGTCAAACCAAGgtatttgttaacatctggcaggtgtctaaacactttaatgtttggcttaatgatatgctcatagttgtttgatatctggcag

Basic information

species Glycine max
transcript GLYMA08G19100.1
intron # 12
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209700578|gb|BW670406.1|BW670406
EST:     CTCAATACCGGCGTCTGCTAAATGTTGTTGAGGACTTCCGTCAAACCAAG                         GCATCTAACGAGGGTTTGATCAATTCTGAAGAGACAGTTGATGGTATGGAG
genomic: CTCAATACCGGCGTCTGCTAAATGTTGTTGAGGACTTCCGTCAAACCAAGgtatttgtta ... tatctggcagGCATCTAACGAGGGTTTGATCAATTCTGAAGAGACAGTTGATGGTATGGAG
EST: gi|8827724|gb|BE211454.1|BE211454
EST:     CTCAATACCGGCGTCTGCTAAATGTTGTTGAGGACTTCCGTCAAACCAAG                         GCATCTAACGAGGGTTTGATCAATTCTGAAAAGACAGTTGATGGTATGGAG
genomic: CTCAATACCGGCGTCTGCTAAATGTTGTTGAGGACTTCCGTCAAACCAAGgtatttgtta ... tatctggcagGCATCTAACGAGGGTTTGATCAATTCTGAAGAGACAGTTGATGGTATGGAG
EST: gi|27809071|gb|CB063493.1|CB063493
EST:     CTCAATACCGGCGTCTGCTAAATGTTGTTGAGGACTTCCGTCAAACCAAG                         GCATCTAACGAGGGTTTGATCAATTCTGAAGAGACAGTTGATGGTATGGAG
genomic: CTCAATACCGGCGTCTGCTAAATGTTGTTGAGGACTTCCGTCAAACCAAGgtatttgtta ... tatctggcagGCATCTAACGAGGGTTTGATCAATTCTGAAGAGACAGTTGATGGTATGGAG
EST: gi|193517275|gb|FK476498.1|FK476498
EST:     CTCAATACCGGCGTCTGCTAAATGTTGTTGAGGACTTCCGTCAAACCAAG                         GCATCTAACGAGGGTTTGATCAATTCTGAAGAGACAGTTGATGGTATGGAG
genomic: CTCAATACCGGCGTCTGCTAAATGTTGTTGAGGACTTCCGTCAAACCAAGgtatttgtta ... tatctggcagGCATCTAACGAGGGTTTGATCAATTCTGAAGAGACAGTTGATGGTATGGAG