1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
AATGTGAAGGCATATCTGAGACGTGGAACTGCTAGAGAAGTACTACTTTGTTATAAGGAGGCTCTAAAAGgtgtggcaattttaaaaaaatggtcttgcatgtcatttgaattcaattattcttgacaagaacatgtatcatagaacagccattacaaggatattggaac...
species | Glycine max |
transcript | GLYMA08G19070.1 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: ACGTGGAACTGCTAGAGAAGTACTACTTTGTTATAAGGAGGCTCTAAAAG ATTTCCAGCATGCTCTCGTTCTTGAACCACAGAACAAGACTGCTAGTCTTGEST: gi|23732795|gb|BU764570.1|BU764570
genomic: ACGTGGAACTGCTAGAGAAGTACTACTTTGTTATAAGGAGGCTCTAAAAGgtgtggcaat ... tgctatgcagATTTCCAGCATGCTCTCGTTCTTGAACCACAGAACAAGACTGCTAGTCTTG
EST: ACGTGGAACTGCTAGAGAAGTACTACTTTGTTATAAGGAGGCTCTAAAAG ATTTCCAGCATGCTCTCGTTCTTGAACCACAGAACAAGACTGCTAGTCTTGEST: gi|209699308|gb|BW670272.1|BW670272
genomic: ACGTGGAACTGCTAGAGAAGTACTACTTTGTTATAAGGAGGCTCTAAAAGgtgtggcaat ... tgctatgcagATTTCCAGCATGCTCTCGTTCTTGAACCACAGAACAAGACTGCTAGTCTTG
EST: ACGTGGAACTGCTAGAGAAGTACTACTTTGTTATAAGGAGGCTCTAAAAG ATTTCCAGCATGCTCTCGTTCTTGAACCACAGAACAAGACTGCTAGTCTTGEST: gi|209708228|gb|BW678598.1|BW678598
genomic: ACGTGGAACTGCTAGAGAAGTACTACTTTGTTATAAGGAGGCTCTAAAAGgtgtggcaat ... tgctatgcagATTTCCAGCATGCTCTCGTTCTTGAACCACAGAACAAGACTGCTAGTCTTG
EST: ACGTGGAACTGCTAGAGAAGTACTACTTTGTTATAAGGAGGCTCTAAAAG ATTTCCAGCATGCTCTCGTTCTTGAACCACAGAACAAGACTGCTAGTCTTG
genomic: ACGTGGAACTGCTAGAGAAGTACTACTTTGTTATAAGGAGGCTCTAAAAGgtgtggcaat ... tgctatgcagATTTCCAGCATGCTCTCGTTCTTGAACCACAGAACAAGACTGCTAGTCTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AATGTGAAGGCATATCTGAGACGTGGAACTGCTAGAGAAGTACTACTTTGTTATAAGGAGGCTCTAAAAGgtgtggcaattttaaaaaaatggtcttgcatgtcatttgaattcaattattcttgacaagaacatgtatcatagaacagccattacaaggatattggaac
- - - - - - - - - - - - - - - - - AGAAGT
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - taaaaaaa