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GTCTGCTTACACATGTTCACTCTGGATTTTCTGAACCAAGTGGCAAATGGCCTTGAAAAAGACAGCATgtatgtgtgttgccttcttaactccaaccttctgcccccattatttgtcctccatcttgcttcttattgttttctgaattccaactgcgaagacatttac...
species | Glycine max |
transcript | GLYMA08G09170.1 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: ACTCTGGATTTTCTGAACCAAGTGGCAAATGGCCTTGAAAAAGACAGCAT TTATCATCTTGCAGAGAAGAAAATACCTTCCATACATGGATATACAATGGGEST: gi|254342038|gb|GR853175.1|GR853175
genomic: ACTCTGGATTTTCTGAACCAAGTGGCAAATGGCCTTGAAAAAGACAGCATgtatgtgtgt ... ttatgtgcagTTATCATCTTGCAGAGAAGAAAATACCTTCCATACATGGATATACAATGGG
EST: ACTCTGGATTTTCTGAACCAAGTGGCAAATGGCCTTGAAAAAGACAGCAT TTATCATCTTGCAGAGAAGAAAATACCTTCCATACATGGATATACAATGGGEST: gi|4313957|gb|AI461076.1|AI461076
genomic: ACTCTGGATTTTCTGAACCAAGTGGCAAATGGCCTTGAAAAAGACAGCATgtatgtgtgt ... ttatgtgcagTTATCATCTTGCAGAGAAGAAAATACCTTCCATACATGGATATACAATGGG
EST: ACTCTGGATTTTCTGAATCAAGTGGCAAATGGCCTTGAAAAAGACAGCAT TTATCATCTTGCAGAGAAGAAAATACCTTCCATACATGGATATACAATGGGEST: gi|8282791|gb|BE020352.1|BE020352
genomic: ACTCTGGATTTTCTGAACCAAGTGGCAAATGGCCTTGAAAAAGACAGCATgtatgtgtgt ... ttatgtgcagTTATCATCTTGCAGAGAAGAAAATACCTTCCATACATGGATATACAATGGG
EST: GAAAAAGACAGCAT TTATCATCTTGCAGAGAAGAAAATACCTTCCATACATGGATATACAATGGGEST: gi|208215335|gb|GE011090.1|GE011090
genomic: GAAAAAGACAGCATgtatgtgtgt ... ttatgtgcagTTATCATCTTGCAGAGAAGAAAATACCTTCCATACATGGATATACAATGGG
EST: ACTCTGGATTTTCTGAACCAAGTGGCAAATGGCCTTGAAAAAGACAGCAT TTATCATCTTGCAGAAGAAAGAAAATAACCTTEST: gi|298176684|gb|HO026805.1|HO026805
genomic: ACTCTGGATTTTCTGAACCAAGTGGCAAATGGCCTTGAAAAAGACAGCATgtatgtgtgt ... ttatgtgcagTTATCATCTTGCAGA-GAA-GAAAATA-CCTT
EST: ACTCTGGATTTTCTGAACCAAGTGGCAAATGGCCTTGAAAAAGACAGCAT TTATCATCTTGCAGAGAAGAAAATACCTTCCATACATGGATATACAATGGGEST: gi|151397105|gb|EV266978.1|EV266978
genomic: ACTCTGGATTTTCTGAACCAAGTGGCAAATGGCCTTGAAAAAGACAGCATgtatgtgtgt ... ttatgtgcagTTATCATCTTGCAGAGAAGAAAATACCTTCCATACATGGATATACAATGGG
EST: ACTCTGGATTTTCTGAATCAAGTGGCAAATGGCCTTGAAAAAGACAGCAT TTATCATCTTGCAGAGAAGAAAATACCTTCCATACATGGATATACAATGGGEST: gi|254329705|gb|GR839258.1|GR839258
genomic: ACTCTGGATTTTCTGAACCAAGTGGCAAATGGCCTTGAAAAAGACAGCATgtatgtgtgt ... ttatgtgcagTTATCATCTTGCAGAGAAGAAAATACCTTCCATACATGGATATACAATGGG
EST: ACTCTGGATTTTCTGAATCAAGTGGCAA-TGGCCTTGAAAAAGACAGCAT TTATCATCTTGCAGAGAAGAAA-TACCTTCCATACATGGATATACA-TGGG
genomic: ACTCTGGATTTTCTGAACCAAGTGGCAAATGGCCTTGAAAAAGACAGCATgtatgtgtgt ... ttatgtgcagTTATCATCTTGCAGAGAAGAAAATACCTTCCATACATGGATATACAATGGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCTGCTTACACATGTTCACTCTGGATTTTCTGAACCAAGTGGCAAATGGCCTTGAAAAAGACAGCATgtatgtgtgttgccttcttaactccaaccttctgcccccattatttgtcctccatcttgcttcttattgttttctgaattccaactgcgaagacatttac
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