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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCCATGCCAAATTATGCACAACCATCAAAATCAACAAATCCATTTGATGTCAGTAACGAACCAACTCCAGTTCAAGCCTCAACAgtatgtgactttcattgatataaaaattgatataaagtgtttttttttatcagcgatatactagtgtgtaatgttccccgtgatacactatacactattt...

Basic information

species Glycine max
transcript GLYMA08G04420.2
intron # 12
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA08G04420.2 (Glycine max), 5'ss of exon 12
lower sequence: Vv11s0016g04210.t01 (Vitis vinifera), 5'ss of exon 10
---CCCATGCCAAATTATGCACAACCATCAAAATCAACAAATCCATTTGATGTCAGTAACGAACCAACTCCAGTTCAAGCCTCAACAgtatgtgactttcattgatataaaaattgatataaagtgtttttttttatcagcgatatactagtgtgtaatgttccccgtgatacactatacactattt--
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CCATTGCCATCAACATTCTCACATTCATCAAAATCAACAAACCCATTTGATCTCAACAATGAACCACCTCCGGCTCAAGCTCCAACAgtaagtgaatcaaattcattcaaatagatatatgt-gcttgatctctgatcttgtcttccttggtgttactttgactaagtgatcagttata-actagtgtt