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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGCGGCAATGGCGGCTTCCCTGCTTGGGAGCCTCAAAGAGCGTACCGTTGGTTAGAGgtaagaaaatatggtttttttcaattggtgaaacgaaatattatacttcacaacattgttttaattaagagacaagtgataactcgtgtctgctggtgcag

Basic information

species Glycine max
transcript GLYMA08G03060.1
intron # 12
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151409823|gb|EV279631.1|EV279631
EST:     GCCTCAAAGAGCGTACCGTTGGTTAGAG                         AAGTTCGATCCAACGGAAATCTTCAAAGACACTCTCATTGAGATGGA
genomic: GCCTCAAAGAGCGTACCGTTGGTTAGAGgtaagaaaat ... gctggtgcagAAGTTCAATCCAACGGAAATCTTCAAAGACACTCTCATTGAGATGGA
EST: gi|192304694|gb|FG998752.1|FG998752
EST:     ATGGCGGCTTCCCTGCTTGGGAGCCTCAAAGAGCGTACCGTTGGTTAGAG                         AAGTTCAATCCAACGGAAATCTTCAAAGACACTCTCATTGAGATGGA
genomic: ATGGCGGCTTCCCTGCTTGGGAGCCTCAAAGAGCGTACCGTTGGTTAGAGgtaagaaaat ... gctggtgcagAAGTTCAATCCAACGGAAATCTTCAAAGACACTCTCATTGAGATGGA