1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
CCAGGCTGATAAATCACATATCACCCTTGTTGAAGCTTTCAGAAACATGCAGATAGAAGAAGGGGATCAGCCTCTTGAGAACGGGGACTCTAACCATGAGgtatactaaatattgggttaacactggacgaaaagcatcaaaatcttctcctaaaataatgttgtccttttgcttctacagagagaataatctataacccaattgattgtcagtggtggtgttagtgttattttatgttgcttttatgtccttttgttccag
species | Glycine max |
transcript | GLYMA07G03890.2 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: AGATAGAAGAAGGGGATCAGCCTCTTGAGAACGGGGACTCTAACCATGAG TTGACTGAACAAAATGGAGAAGAGCACTATACAGAGGAACATGAGGAGCACEST: gi|298194070|gb|HO040718.1|HO040718
genomic: AGATAGAAGAAGGGGATCAGCCTCTTGAGAACGGGGACTCTAACCATGAGgtatactaaa ... tttgttccagTTGACTGAACAAAATGGAGAAGAGCACTATACAGAGGAACATGAGGAGCAC
EST: AGATAGAAGAAGGGGATCAGCCTCTTGAGAACGGGGACTCTAACCATGAG TTGACTGAACAAAATGGAGAAGAGCACTATACAGAGGAACATGAGGAGCACEST: gi|120495788|gb|EH223955.1|EH223955
genomic: AGATAGAAGAAGGGGATCAGCCTCTTGAGAACGGGGACTCTAACCATGAGgtatactaaa ... tttgttccagTTGACTGAACAAAATGGAGAAGAGCACTATACAGAGGAACATGAGGAGCAC
EST: AGATAGAAGAAGGGGATCAGCCTCTTGAGAACGGGGACTTTAACCATGAG TTGACTGAACAAAATGGAGAAGAGCACTATACAGAGGAACATGAGGAGCACEST: gi|151404989|gb|EV274803.1|EV274803
genomic: AGATAGAAGAAGGGGATCAGCCTCTTGAGAACGGGGACTCTAACCATGAGgtatactaaa ... tttgttccagTTGACTGAACAAAATGGAGAAGAGCACTATACAGAGGAACATGAGGAGCAC
EST: AGATAGAAGAAGGGGATCAGCCTCTTGAGAACGGGGACTCTAACCATGAG TTGACTGAACAAAATGGAGAAGAGCACTATACAGAGGAACATGAGGAGCACEST: gi|58020327|gb|CX707069.1|CX707069
genomic: AGATAGAAGAAGGGGATCAGCCTCTTGAGAACGGGGACTCTAACCATGAGgtatactaaa ... tttgttccagTTGACTGAACAAAATGGAGAAGAGCACTATACAGAGGAACATGAGGAGCAC
EST: AGATAGAAGAAGGGGATCAGCCTCTTGAGAACGGGGACTCTAACCATGAG TTGACTGAACAAAATGGAGAAGAGCACTATACAGAGGAACATGAGGAGCACEST: gi|58016785|gb|CX703527.1|CX703527
genomic: AGATAGAAGAAGGGGATCAGCCTCTTGAGAACGGGGACTCTAACCATGAGgtatactaaa ... tttgttccagTTGACTGAACAAAATGGAGAAGAGCACTATACAGAGGAACATGAGGAGCAC
EST: AGATAGAAGAAGGGGATCAGCCTCTTGAGAACGGGGACTCTAACCATGAG TTGACTGAACAAAATGGAGAAGAGCACTATACAGAGGAACATGAGGAGCACEST: gi|298182438|gb|HO026613.1|HO026613
genomic: AGATAGAAGAAGGGGATCAGCCTCTTGAGAACGGGGACTCTAACCATGAGgtatactaaa ... tttgttccagTTGACTGAACAAAATGGAGAAGAGCACTATACAGAGGAACATGAGGAGCAC
EST: AGATAGAAGAAGGGGATCAGCCTCTTGAGAACGGGGACTCTAACCATGAG TTGACTGAACAAAATGGAGAAGAGCACTATACAGAGGAACATGAGGAGCAC
genomic: AGATAGAAGAAGGGGATCAGCCTCTTGAGAACGGGGACTCTAACCATGAGgtatactaaa ... tttgttccagTTGACTGAACAAAATGGAGAAGAGCACTATACAGAGGAACATGAGGAGCAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCAGGCTGATAAATCACATATCACCCTTGTTGAAGCTTTCAGAAACATGCAGATAGAAGAAGGGGATCAGCCTCTTGAGAACGGGGACTCTAACCATGAGgtatactaaatattgggttaacactggacgaaaagcatcaaaatcttctcctaaaataatgttgtccttttgcttctacagagagaataatctataacccaattgattgtcagtggtggtgttagtgttattttatgttgcttttatgtccttttgttccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG