1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GGGAAGATCAGGTGATGAGGTTGAGCAATGTCCAGTACCTGCAAGAGTGACTGTAAGGCGAAGGTCTAGTGTTGCTGCAATTGAGCGGAAGGATTCTGGGgtatgtcactaaatttatctattaagtttgtcattgcatttgtatacatgaaataatttcctatatactggatgctttcaactttcaag
species | Glycine max |
transcript | GLYMA07G01830.3 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: CTGTAAGGCGAAGGTCTAGTGTTGCTGCAATTGAGCGGAAGGATTCTGGG GTATATACAAGTTCAAAGGGAAATTCCTCGAAAAGAGGTGGCTTAGAAATGEST: gi|9820238|gb|BE555748.1|BE555748
genomic: CTGTAAGGCGAAGGTCTAGTGTTGCTGCAATTGAGCGGAAGGATTCTGGGgtatgtcact ... aactttcaagGTATATACAAGTTCAAAGGGAAATTCCTCGAAAAGAGGTGGCTTAGAAATG
EST: CTGTAAGGCGAAGGTCTAGTGTTGCTGCAATTGAGCGGAAGGATTCTGGG GTATATACAAGTTCAAAGGGAAATTCCTCGAAAAGAGGTGGCTTANAAATGEST: gi|13252516|gb|BG363419.1|BG363419
genomic: CTGTAAGGCGAAGGTCTAGTGTTGCTGCAATTGAGCGGAAGGATTCTGGGgtatgtcact ... aactttcaagGTATATACAAGTTCAAAGGGAAATTCCTCGAAAAGAGGTGGCTTAGAAATG
EST: CTGTAAGGCGAAGGTCTAGTGTTGCTGCAATTGAGCGGAAGGATTCTGGG GTATATACAAGTTCAAAGGGAAATTCCTCGAAAAGAGGTGGCTTAGAAATGEST: gi|209703007|gb|BW667491.1|BW667491
genomic: CTGTAAGGCGAAGGTCTAGTGTTGCTGCAATTGAGCGGAAGGATTCTGGGgtatgtcact ... aactttcaagGTATATACAAGTTCAAAGGGAAATTCCTCGAAAAGAGGTGGCTTAGAAATG
EST: CTGTAAGGCGAAGGTCTAGTGTTGCTGCAATTGAGCGGAAGGATTCTGGG GTATATACAAGTTCAAAGGGAAATTCCTCGAAAAGAGGTGGCTTAGAAATG
genomic: CTGTAAGGCGAAGGTCTAGTGTTGCTGCAATTGAGCGGAAGGATTCTGGGgtatgtcact ... aactttcaagGTATATACAAGTTCAAAGGGAAATTCCTCGAAAAGAGGTGGCTTAGAAATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGAAGATCAGGTGATGAGGTTGAGCAATGTCCAGTACCTGCAAGAGTGACTGTAAGGCGAAGGTCTAGTGTTGCTGCAATTGAGCGGAAGGATTCTGGGgtatgtcactaaatttatctattaagtttgtcattgcatttgtatacatgaaataatttcctatatactggatgctttcaactttcaag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC