1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
ATTTGTTTTTAGTGCTTGGGCCTGTGCTGCTGTTGGCAGAACTGCACAAGAAGTTGTTAACGAAGTGAGAAGGCAGTTCATTGAGAGGCCTGGTATAATGgtgagtttgggtttgtaaagtaatattatgtatgccagtttaggttttgatcttctctctttttttcccttttatgcttttgacag
species | Glycine max |
transcript | GLYMA07G00350.1 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: AAGTTGTTAACGAAGTGAGAAGGCAGTTCATTGAGAGGCCTGGTATAATG GATTACAAGGAGAAACCAGATTATGGTCGCTGTGTTGCTATTGTACCATCTEST: gi|58016814|gb|CX703556.1|CX703556
genomic: AAGTTGTTAACGAAGTGAGAAGGCAGTTCATTGAGAGGCCTGGTATAATGgtgagtttgg ... cttttgacagGATTACAAGGAGAAACCAGATTATGGTCGCTGTGTTGCTATTGTAGCATCT
EST: AAGTTGTTAACGAAGTGAGAAGGCAGTTCATTGAGAGGCCTGGTATAATG GATTACAAGGAGAAACCAGATTATGGTCGCTGTGTTGCTATTGTAGCATCTEST: gi|192305808|gb|FG995736.1|FG995736
genomic: AAGTTGTTAACGAAGTGAGAAGGCAGTTCATTGAGAGGCCTGGTATAATGgtgagtttgg ... cttttgacagGATTACAAGGAGAAACCAGATTATGGTCGCTGTGTTGCTATTGTAGCATCT
EST: AAGTTGTTAACGAAGTGAGAAGGCAGTTCATTGAGAGGCCTGGTATAATG GATTACAAGGAGAAACCAGATTATGGTCGCTGTGTTGCTATTGTAGCATCTEST: gi|57575699|gb|CX548674.1|CX548674
genomic: AAGTTGTTAACGAAGTGAGAAGGCAGTTCATTGAGAGGCCTGGTATAATGgtgagtttgg ... cttttgacagGATTACAAGGAGAAACCAGATTATGGTCGCTGTGTTGCTATTGTAGCATCT
EST: AAGTTGTTAACGAAGTGAGAAGGCAGTTCATTGAGAGGCCTGGTATAATG GATTACAAGGAGAAACCAGATTATGGTCGCTGTGTTGCTATTGTAGCATCTEST: gi|58015021|gb|CX701763.1|CX701763
genomic: AAGTTGTTAACGAAGTGAGAAGGCAGTTCATTGAGAGGCCTGGTATAATGgtgagtttgg ... cttttgacagGATTACAAGGAGAAACCAGATTATGGTCGCTGTGTTGCTATTGTAGCATCT
EST: AAGTTGTTAACGAAGTGAGAAGGCAGTTCATTGAGAGGCCTGGTATAATG GATTACAAGGAGAAACCAGATTATGGTCGCTGTGTTGCTATTGTAGCATCT
genomic: AAGTTGTTAACGAAGTGAGAAGGCAGTTCATTGAGAGGCCTGGTATAATGgtgagtttgg ... cttttgacagGATTACAAGGAGAAACCAGATTATGGTCGCTGTGTTGCTATTGTAGCATCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTTGTTTTTAGTGCTTGGGCCTGTGCTGCTGTTGGCAGAACTGCACAAGAAGTTGTTAACGAAGTGAGAAGGCAGTTCATTGAGAGGCCTGGTATAATGgtgagtttgggtttgtaaagtaatattatgtatgccagtttaggttttgatcttctctctttttttcccttttatgcttttgacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG