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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AATGATTTGGTCCATGGCTGGGGCCTTGATTTTGCTCTTAGAAAATGTGTTGAGgtgagtttgttgtctcattacttaaattcatctaatttcaattttttttaattgcaattgctatgctatagaacattaaactaatatctctcactatcatgtag

Basic information

species Glycine max
transcript GLYMA05G30830.1
intron # 12
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|10256404|gb|BE824170.1|BE824170
EST:     ATTTGGTCCATGGCTGGGGCCTTGATTTTGCTCTTAGAAAATGTGTTGAG                         CCTGCCCATGAGAAAATTGGAGTTGTTGATTCTCAGTGGATTATTCATCAA
genomic: ATTTGGTCCATGGCTGGGGCCTTGATTTTGCTCTTAGAAAATGTGTTGAGgtgagtttgt ... tatcatgtagCCTGCCCATGAGAAAATTGGAGTTGTTGATTCTCAGTGGATTATTCATCAA
EST: gi|207713488|gb|GD696171.1|GD696171
EST:     ATTTGGTCCATGGCTGGGGCCTTGATTTTGCTCTTAGAAAATGTGTTGAG                         CCTGCCCATGAGAAAATTGGAGTTGTTGATTCTCAGTGGATTATTCATCAA
genomic: ATTTGGTCCATGGCTGGGGCCTTGATTTTGCTCTTAGAAAATGTGTTGAGgtgagtttgt ... tatcatgtagCCTGCCCATGAGAAAATTGGAGTTGTTGATTCTCAGTGGATTATTCATCAA
EST: gi|13312427|gb|BG406078.1|BG406078
EST:     ATTTGGTCCATGGCTGGGGCCTTGATTTTGCTCTTAGAAAATGTGTTGAG                         CCTGCCCATGAGAAAATTGGAGTTGTTGATTCTCAGTGGATTATTCATCAA
genomic: ATTTGGTCCATGGCTGGGGCCTTGATTTTGCTCTTAGAAAATGTGTTGAGgtgagtttgt ... tatcatgtagCCTGCCCATGAGAAAATTGGAGTTGTTGATTCTCAGTGGATTATTCATCAA
EST: gi|7146333|gb|AW508255.1|AW508255
EST:     ATTTGGTCCATGGCTGGGGCCTTGATTTTGCTCTTAGAAAATGTGTTGAG                         CCTGCCCATGAGAAAATTGGAGTTGTTGATTCTCAGTGGATTATTCATCAA
genomic: ATTTGGTCCATGGCTGGGGCCTTGATTTTGCTCTTAGAAAATGTGTTGAGgtgagtttgt ... tatcatgtagCCTGCCCATGAGAAAATTGGAGTTGTTGATTCTCAGTGGATTATTCATCAA
EST: gi|193459553|gb|FK423410.1|FK423410
EST:     GGCTGGGGCCTTGATTTTGCTCTTAGAAAATGTGTTGAG                         CCTGCCCATGAGAAAATTGGAGTTGTTGATTCTCAGTGGATTATTCATCAA
genomic: GGCTGGGGCCTTGATTTTGCTCTTAGAAAATGTGTTGAGgtgagtttgt ... tatcatgtagCCTGCCCATGAGAAAATTGGAGTTGTTGATTCTCAGTGGATTATTCATCAA
EST: gi|14009195|gb|BG725799.1|BG725799
EST:     ATTTGGTCCATGGCTGGGGCCTTGATTTTGCTCTTAGAAAATGTGTTGAG                         CCTGCCCATGAGAAAATTGGAGTTGTTGATTCTCAGTGGATTATTCATCAA
genomic: ATTTGGTCCATGGCTGGGGCCTTGATTTTGCTCTTAGAAAATGTGTTGAGgtgagtttgt ... tatcatgtagCCTGCCCATGAGAAAATTGGAGTTGTTGATTCTCAGTGGATTATTCATCAA