1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GGATAAAGGTTTTGGATTTGTCAGATACAACACTCATGACGAAGCTGCACTGGCCATTCAGATGGCTAATGGAAGACTTGTTCGTGGGAAGAATATGAAGgtgagaattctttcacttgttgcttatctggtcaactaattaattgctattctttgttgaggctgatggttgccccatataataatgcctattgcctagt...
species | Glycine max |
transcript | GLYMA04G08130.1 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: TGGCCATTCAGATGGCTAATGGAAGACTTGTTCGTGGGAAGAATATGAAG TGTCCATGGGGTAGTAAACCAACTCCACCTGGAACGGCTTCAEST: gi|254315291|gb|GR830284.1|GR830284
genomic: TGGCCATTCAGATGGCTAATGGAAGACTTGTTCGTGGGAAGAATATGAAGgtgagaattc ... atttgtgcagTGTTCATGGGGTAGTAAACCAACTCCACCTGGAACGGCTTCA
EST: GGCCCATTCAGATGGCTAATGGAAGACTTGTTCGTGGGAAGAATATGAAG TGTTCATGGGGTAGTAAACCAACTCCACCTGGAACGGCTTCAAACCCACTAEST: gi|9203994|gb|BE330218.1|BE330218
genomic: GG-CCATTCAGATGGCTAATGGAAGACTTGTTCGTGGGAAGAATATGAAGgtgagaattc ... atttgtgcagTGTTCATGGGGTAGTAAACCAACTCCACCTGGAACGGCTTCAAACCCACTA
EST: TGGCCATTCAGATGGCTAATGGAAGACTTGTTCGTGGGAAGAATATGAAG TGTTCATGGGGTAGTAAACCAACTCCACCTGGAACGGCTTCAAACCCACTAEST: gi|151411749|gb|EV281560.1|EV281560
genomic: TGGCCATTCAGATGGCTAATGGAAGACTTGTTCGTGGGAAGAATATGAAGgtgagaattc ... atttgtgcagTGTTCATGGGGTAGTAAACCAACTCCACCTGGAACGGCTTCAAACCCACTA
EST: TGGCCATTCAGATGGCTAATGGAAGACTTGTTCGTGGGAAGAATATGAAG TGTTCATGGGGTAGTAAACCAACTCCACCTGGAACGGCTTCAAACCCACTAEST: gi|22927107|gb|BU544246.1|BU544246
genomic: TGGCCATTCAGATGGCTAATGGAAGACTTGTTCGTGGGAAGAATATGAAGgtgagaattc ... atttgtgcagTGTTCATGGGGTAGTAAACCAACTCCACCTGGAACGGCTTCAAACCCACTA
EST: TGGCCATTCAGATGGCTAATGGAAGACTTGTTCGTGGGAAGAATATGAAG TGTTCATGGGGTAGTAAACCAACTCCACCTGGAACGGCTTCAAACCCACTAEST: gi|15664501|gb|BI701872.1|BI701872
genomic: TGGCCATTCAGATGGCTAATGGAAGACTTGTTCGTGGGAAGAATATGAAGgtgagaattc ... atttgtgcagTGTTCATGGGGTAGTAAACCAACTCCACCTGGAACGGCTTCAAACCCACTA
EST: GGAAGACTTGTTCGTGGGAAGAATATGAAG TGTTCATGGGGTAGTAAACCAACTCCACCTGGAACGGCTTCAAACCCACTA
genomic: GGAAGACTTGTTCGTGGGAAGAATATGAAGgtgagaattc ... atttgtgcagTGTTCATGGGGTAGTAAACCAACTCCACCTGGAACGGCTTCAAACCCACTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGATAAAGGTTTTGGATTTGTCAGATACAACACTCATGACGAAGCTGCACTGGCCATTCAGATGGCTAATGGAAGACTTGTTCGTGGGAAGAATATGAAGgtgagaattctttcacttgttgcttatctggtcaactaattaattgctattctttgttgaggctgatggttgccccatataataatgcctattgcctagt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA