1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
AGCTTAGGGTCCTCCAGTATGACGGTGCTCATGCAGTGAATGGCACTGGACCAAGTTACTTTCCTGAGGAGACCATCGTTGGTGTCAGTCAGTGAGCAAGgttatacattgattctttgaggatttataatgttaatttgacgactcgataagaataggtggttttgatttttgtctagatagatgcttgatgagtgaaa...
species | Glycine max |
transcript | GLYMA03G32620.2 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: CCAAGTTACTTTCCTGAGGAGACCATCGTTGGTGTCAGTCAGTGAGCAAG GTTTAGACGAATGATTGGACATGTAATTCAAACATCTGCTTCACATTACTTEST: gi|13240435|gb|BG359744.1|BG359744
genomic: CCAAGTTACTTTCCTGAGGAGACCATCGTTGGTGTCAGTCAGTGAGCAAGgttatacatt ... ccaattgtagGTTTAGACGAATGATTGGACATGTAATTCAAACATCTGCTTCACATTACTT
EST: CCAAGTTACTTTCCTGAGGAGACCATCGTTGGTGTCAGTCAGTGAGCAAG GTTTAGACGAATGATTGGACATGTAATTCAAACATCTGCTTCACATTACTTEST: gi|254330519|gb|GR841784.1|GR841784
genomic: CCAAGTTACTTTCCTGAGGAGACCATCGTTGGTGTCAGTCAGTGAGCAAGgttatacatt ... ccaattgtagGTTTAGACGAATGATTGGACATGTAATTCAAACATCTGCTTCACATTACTT
EST: CCAAGTTACTTTCCTGAGGAGACCATCGTTGGTGTCAGTCAGTGAGCAAG GTTTAGACGAATGATTGGACATGTAATTCAAACATCTGCTTCACATTACTTEST: gi|8401969|gb|BE057603.1|BE057603
genomic: CCAAGTTACTTTCCTGAGGAGACCATCGTTGGTGTCAGTCAGTGAGCAAGgttatacatt ... ccaattgtagGTTTAGACGAATGATTGGACATGTAATTCAAACATCTGCTTCACATTACTT
EST: CCAAGTTACTTTCCTGAGGAGACCATCGTTGGTGTCAGTCAGTGAGCAAG GTTTAGACGAATGATTGGACATGTAATTCAAACATCTGCTTCACATTACTTEST: gi|13480824|gb|BG510167.1|BG510167
genomic: CCAAGTTACTTTCCTGAGGAGACCATCGTTGGTGTCAGTCAGTGAGCAAGgttatacatt ... ccaattgtagGTTTAGACGAATGATTGGACATGTAATTCAAACATCTGCTTCACATTACTT
EST: CCAAGTTACTTTCCTGAGGAGACCATCGTTGGTGTCAGTCAGTGAGCAAG GTTTAGACGAATGATTGGACATGTAATTCAAACATCTGCTTCACATTACTT
genomic: CCAAGTTACTTTCCTGAGGAGACCATCGTTGGTGTCAGTCAGTGAGCAAGgttatacatt ... ccaattgtagGTTTAGACGAATGATTGGACATGTAATTCAAACATCTGCTTCACATTACTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGCTTAGGGTCCTCCAGTATGACGGTGCTCATGCAGTGAATGGCACTGGACCAAGTTACTTTCCTGAGGAGACCATCGTTGGTGTCAGTCAGTGAGCAAGgttatacattgattctttgaggatttataatgttaatttgacgactcgataagaataggtggttttgatttttgtctagatagatgcttgatgagtgaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG