1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
TGAACCTCAAACTCAGCTCTCTTCTCATGCATTCTCTGATCTAAATGCTTCACAGGAGTTTGCTGGTGGCATGATGAAGATTGTCCCTTCAGATGTTGATgtaagtttatcataatcaagatgaggttctcccctccccttcaaaatggggtttgtggactcagcatttaatggttggattagagtggttcatttttggaaagcattggcactgtttgctgacattctttgtaattttttgtag
species | Glycine max |
transcript | GLYMA02G35850.2 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: CACAGGAGTTTGCTGGTGGCATGATGAAGATTGTCCCTTCAGATGTTGAT AATGATGCAGATTATTGGCTTCTATCAGATGCTGACGTTAGTATAACAGATEST: gi|208098918|gb|GD892707.1|GD892707
genomic: CACAGGAGTTTGCTGGTGGCATGATGAAGATTGTCCCTTCAGATGTTGATgtaagtttat ... ttttttgtagAATGATGCAGATTATTGGCTTCTATCAGATGCTGACGTTAGTATAACAGAT
EST: AGTTTGCTGGTGGCATGATGAAGATTGTCCCTTCAGATGTTGAT AATGATGCAGATTATTGGCTTCTATCAGATGCTGACGTTAGTATAACAGATEST: gi|13790369|gb|BG652960.1|BG652960
genomic: AGTTTGCTGGTGGCATGATGAAGATTGTCCCTTCAGATGTTGATgtaagtttat ... ttttttgtagAATGATGCAGATTATTGGCTTCTATCAGATGCTGACGTTAGTATAACAGAT
EST: CACAGGAGTTTGCTGGTGGCATGATGAAGATTGTCCCTTCAGATGTTGAT AATGATGCAGATTATTGGCTTCTATCAGATGCTGACGGTAGTATAACAGAT
genomic: CACAGGAGTTTGCTGGTGGCATGATGAAGATTGTCCCTTCAGATGTTGATgtaagtttat ... ttttttgtagAATGATGCAGATTATTGGCTTCTATCAGATGCTGACGTTAGTATAACAGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGAACCTCAAACTCAGCTCTCTTCTCATGCATTCTCTGATCTAAATGCTTCACAGGAGTTTGCTGGTGGCATGATGAAGATTGTCCCTTCAGATGTTGATgtaagtttatcataatcaagatgaggttctcccctccccttcaaaatggggtttgtggactcagcatttaatggttggattagagtggttcatttttggaaagcattggcactgtttgctgacattctttgtaattttttgtag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG