1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
TGAGCACATACTACTTGCGTATGGTCGGCGCCATGGTTCTCTTCTTAAAAGTATTGTCATTGATGGAGAAACAACATTACCTATATATACAGTGTTAGAGgtaaaatgctctctctaaaaaaaaattctgatgtgaattgctcttatatctaaccaccctttgtattctgtataatcttttagtatgaggtaagtatgat...
species | Glycine max |
transcript | GLYMA19G35370.3 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: GTATTGTCATTGATGGAGAAACAACATTACCTATATATACAGTGTTAGAG GTATACAGAGTGTCAGATATGGAACTTGTTAGGGTGCTTCCTAGTGCAGAAEST: gi|193686900|gb|FK632523.1|FK632523
genomic: GTATTGTCATTGATGGAGAAACAACATTACCTATATATACAGTGTTAGAGgtaaaatgct ... tgtcttttagGTATACAGAGTGTCAGATATGGAACTTGTTAGGGTGCTTCCTAGTGCAGAA
EST: GTNTTGTCATTGATGGAGAAACAACATTACCTATATATACAGTGTTAGAG GTATACAGAGTGTCAGATAEST: gi|12690329|gb|BG156665.1|BG156665
genomic: GTATTGTCATTGATGGAGAAACAACATTACCTATATATACAGTGTTAGAGgtaaaatgct ... tgtcttttagGTATACAGAGTGTCAGATA
EST: GTATTGTCATTGATGGAGAAACAACATTACCTATATATACAGTGTTAGAG GTATACAGAGTGTCAGATATGGAACTTGTTAGGGTGCTTCCTAGTGCAGAA
genomic: GTATTGTCATTGATGGAGAAACAACATTACCTATATATACAGTGTTAGAGgtaaaatgct ... tgtcttttagGTATACAGAGTGTCAGATATGGAACTTGTTAGGGTGCTTCCTAGTGCAGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGAGCACATACTACTTGCGTATGGTCGGCGCCATGGTTCTCTTCTTAAAAGTATTGTCATTGATGGAGAAACAACATTACCTATATATACAGTGTTAGAGgtaaaatgctctctctaaaaaaaaattctgatgtgaattgctcttatatctaaccaccctttgtattctgtataatcttttagtatgaggtaagtatgat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA