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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGGCAGAACCAAAGGACTCTATATACTTATTGGATAATTGTCCTCATGATTGGCTTTTCTTGCGTTGCAAGGCTGTGgtaagattatctagctacttagttcacccattctagtagttaaaatcacattgaaatgttgcaataaaagatcataattctgccaaatttttaaattctt...

Basic information

species Glycine max
transcript GLYMA18G28130.1
intron # 11
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15288220|gb|BI472111.1|BI472111
EST:     TATTGGATAATTGCCCTCATGATTGGCTTTTCTTGCGTTGCAAGGCTGTG                         GTTCATCACGGAGGTGCTGGCACAACAGCTGCGGGGCTCAAAGCTGCT
genomic: TATTGGATAATTGTCCTCATGATTGGCTTTTCTTGCGTTGCAAGGCTGTGgtaagattat ... tttgttgcagGTTCATCACGGAGGTGCTGGCACAACAGCTGCGGGGCTCAAAGCTGCT
EST: gi|22525980|gb|BU084791.1|BU084791
EST:     TATTGGATAATTGCCCTCATGATTGGCTTTTCTTGCGTTGCAAGGCTGTG                         GTTCATCACGGAGGTGCTGGCACAACAGCTGCGGGGCTCAAAGCTGCT
genomic: TATTGGATAATTGTCCTCATGATTGGCTTTTCTTGCGTTGCAAGGCTGTGgtaagattat ... tttgttgcagGTTCATCACGGAGGTGCTGGCACAACAGCTGCGGGGCTCAAAGCTGCT
EST: gi|9204101|gb|BE330325.1|BE330325
EST:     TATTGGATAATNGTNCTCATGATTGGCTNTTCTTGCGTTGCAAGGCTGTG                         GTTCATCACGGAAGTGCTTGCACAACAGCTGCGGGGCTCAAAGCTGCT
genomic: TATTGGATAATTGTCCTCATGATTGGCTTTTCTTGCGTTGCAAGGCTGTGgtaagattat ... tttgttgcagGTTCATCACGGAGGTGCTGGCACAACAGCTGCGGGGCTCAAAGCTGCT
EST: gi|6566103|gb|AW233863.1|AW233863
EST:     TATTGGATAATTGTCCTCATGATTGGCTTTTCTTGCGTTGCAAGGCTGTG                         GTTCATCACGGAGGTGCTGGCACAACAGCTGCGGGGCTCAAAGCTGCT
genomic: TATTGGATAATTGTCCTCATGATTGGCTTTTCTTGCGTTGCAAGGCTGTGgtaagattat ... tttgttgcagGTTCATCACGGAGGTGCTGGCACAACAGCTGCGGGGCTCAAAGCTGCT
EST: gi|51338437|gb|CO982303.1|CO982303
EST:     TATTGGATAATTGCCCTCATGATTGGCTTTTCTTGCGTTGCAAGGCTGTG                         GTTCATCACGGAGGTGCTGGCACAACAGCTGCGGGGCTCAAAGCTGCT
genomic: TATTGGATAATTGTCCTCATGATTGGCTTTTCTTGCGTTGCAAGGCTGTGgtaagattat ... tttgttgcagGTTCATCACGGAGGTGCTGGCACAACAGCTGCGGGGCTCAAAGCTGCT
EST: gi|58017155|gb|CX703897.1|CX703897
EST:     TATTGGATAATTGTCCTCATGATTGGCTTTTCTTGCGTTGCAAGGCTGTG                         GTTCATCACGGAGGTGCTGGCACAACAGCTGCGGGGCTCAAAGCTGCT
genomic: TATTGGATAATTGTCCTCATGATTGGCTTTTCTTGCGTTGCAAGGCTGTGgtaagattat ... tttgttgcagGTTCATCACGGAGGTGCTGGCACAACAGCTGCGGGGCTCAAAGCTGCT