1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
CAGGAAAGGTCAAGGAGCAAATTATTCCGCCTTTGCAATTTTTAGAAGTCCACCAGAGGCAGATGGGGCCTATGAAAATGTCCAAGGAAGCCAATTAAAGgtacatatattgtataccaatgtccaatggttctacctgatatcactaaaactgcttgttgattagatgagctaatgaaacacataaatgtggatcatat...
species | Glycine max |
transcript | GLYMA17G18400.1 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: CACCAGAGGCAGATGGGGCCTATGAAAATGTCCAAGGAAGCCAATTAAAG GATACATATGGACATCCCCAGAAGCTTGTAACATTCCGTCTAAGTACAGGCEST: gi|58016379|gb|CX703121.1|CX703121
genomic: CACCAGAGGCAGATGGGGCCTATGAAAATGTCCAAGGAAGCCAATTAAAGgtacatatat ... tttatgtcagGATACATATGGACATCCCCAGAAGCTTGTAACATTCCGTCTAAGTACAGGC
EST: CACCAGAGGCAGATGGGGCCTATGAAAATGTCCAAGGAAGCCAATTAAAG GATACATATGGACATCCCCAGAAGCTTGTAATATTCCGTCTAAGTACAGGCEST: gi|17964645|gb|BM271377.1|BM271377
genomic: CACCAGAGGCAGATGGGGCCTATGAAAATGTCCAAGGAAGCCAATTAAAGgtacatatat ... tttatgtcagGATACATATGGACATCCCCAGAAGCTTGTAACATTCCGTCTAAGTACAGGC
EST: AAGGAAGCCAATTAAAG GATACATATGGACATCCCCAGAAGCTTGTAACATTCCGTCTAAGTACAGGCEST: gi|37996891|gb|CF808480.1|CF808480
genomic: AAGGAAGCCAATTAAAGgtacatatat ... tttatgtcagGATACATATGGACATCCCCAGAAGCTTGTAACATTCCGTCTAAGTACAGGC
EST: CAGATGGGGCCTATGAAAATGTCCAAGGAAGCCAATTAAAG GATACATATGGACATCCCCAGAAGCTTGTAACATTCCGTCTAAGTACAGGC
genomic: CAGATGGGGCCTATGAAAATGTCCAAGGAAGCCAATTAAAGgtacatatat ... tttatgtcagGATACATATGGACATCCCCAGAAGCTTGTAACATTCCGTCTAAGTACAGGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAGGAAAGGTCAAGGAGCAAATTATTCCGCCTTTGCAATTTTTAGAAGTCCACCAGAGGCAGATGGGGCCTATGAAAATGTCCAAGGAAGCCAATTAAAGgtacatatattgtataccaatgtccaatggttctacctgatatcactaaaactgcttgttgattagatgagctaatgaaacacataaatgtggatcatat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA