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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTCCCATGTTCACAGCATCTGGTTTACGTGTCCGTTTCCTCAAGgtacgtatccgtcgcaacctactgttccattttcccctgttttctttcataactaagtgattctattttctttatttactctcttcag

Basic information

species Glycine max
transcript GLYMA17G16630.3
intron # 11
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254325028|gb|GR834453.1|GR834453
EST:     GTTCCCATGTTCACAGCATCTGGTTTACGTGTCCGTTTCCTCAAG                         GTGTGGGAGAAGAGTGGGTACAATACCGTTGAGTGGGTTCGTTACATTACA
genomic: GTTCCCATGTTCACAGCATCTGGTTTACGTGTCCGTTTCCTCAAGgtacgtatcc ... ctctcttcagGTGTGGGAGAAGAGTGGGTACAATACCGTTGAGTGGGTTCGTTACATTACA
EST: gi|254325029|gb|GR834454.1|GR834454
EST:     GTTCCCATGTTCACAGCATCTGGTTTACGTGTCCGTTTCCTCAAG                         GTGTGGGAGAAGAGTGGGTACAATACCGTTGAGTGGGTTCGTTACATTACA
genomic: GTTCCCATGTTCACAGCATCTGGTTTACGTGTCCGTTTCCTCAAGgtacgtatcc ... ctctcttcagGTGTGGGAGAAGAGTGGGTACAATACCGTTGAGTGGGTTCGTTACATTACA
EST: gi|193382059|gb|FK345746.1|FK345746
EST:     GTTCCCATGTTCACAGCATCTGGTTTACGTGTCCGTTTCCTCAAG                         GTGTGGGAGAAGAGTGGGTACAATACCGTTGAGTGGGTTCGTTACA
genomic: GTTCCCATGTTCACAGCATCTGGTTTACGTGTCCGTTTCCTCAAGgtacgtatcc ... ctctcttcagGTGTGGGAGAAGAGTGGGTACAATACCGTTGAGTGGGTTCGTTACA
EST: gi|37996956|gb|CF808545.1|CF808545
EST:     GTTCCCATGTTCACAGCATCTGGTTTACGTGTCCGTTTCCTCAAG                         GTGTGGGAGAAGAGTGGGTACAATACCGTTGAGTGGGTTCGTTACATTACA
genomic: GTTCCCATGTTCACAGCATCTGGTTTACGTGTCCGTTTCCTCAAGgtacgtatcc ... ctctcttcagGTGTGGGAGAAGAGTGGGTACAATACCGTTGAGTGGGTTCGTTACATTACA
EST: gi|254315557|gb|GR825366.1|GR825366
EST:     GTTCCCATGTTCACAGCATCTGGTTTACGTGTCCGTTTCCTCAAG                         GTGTGGGAGAAGAGTGGGTACAATACCGTTGAGTGGGTTCGTTACATTACA
genomic: GTTCCCATGTTCACAGCATCTGGTTTACGTGTCCGTTTCCTCAAGgtacgtatcc ... ctctcttcagGTGTGGGAGAAGAGTGGGTACAATACCGTTGAGTGGGTTCGTTACATTACA
EST: gi|254322718|gb|GR835540.1|GR835540
EST:     GTTCCCATGTTCACAGCATCTGGTTTACGTGTCCGTTTCCTCAAG                         GTGTGGGAGAAGAGTGGGTACAATACCGTTGAGTGGGTTCGTTACATTACA
genomic: GTTCCCATGTTCACAGCATCTGGTTTACGTGTCCGTTTCCTCAAGgtacgtatcc ... ctctcttcagGTGTGGGAGAAGAGTGGGTACAATACCGTTGAGTGGGTTCGTTACATTACA
EST: gi|5606842|gb|AI900940.1|AI900940
EST:     GTTCCCATGTTCACAGCATCTGGTTTACGTGTCCGTTTCCTCAAG                         GTGTGGGAGAAGAGTGGGTACAATACCGTTGAGTGGGTTCGTTACATTACA
genomic: GTTCCCATGTTCACAGCATCTGGTTTACGTGTCCGTTTCCTCAAGgtacgtatcc ... ctctcttcagGTGTGGGAGAAGAGTGGGTACAATACCGTTGAGTGGGTTCGTTACATTACA
EST: gi|207734392|gb|GD710102.1|GD710102
EST:     GTTCCCATGTTCACAGCATCTGGTTTACGTGTCCGTTTCCTCAAG                         GTGTGGGAGAAGAGTGGGTACAATACCGTTGAGTGGGTTCGTTACATTACA
genomic: GTTCCCATGTTCACAGCATCTGGTTTACGTGTCCGTTTCCTCAAGgtacgtatcc ... ctctcttcagGTGTGGGAGAAGAGTGGGTACAATACCGTTGAGTGGGTTCGTTACATTACA
EST: gi|19346229|gb|BM891109.1|BM891109
EST:     GTTCCCATGTTCACAGCATCTGGTTTACGTGTCCGTTTCCTCAAG                         GTGTGGGAGAAGAGTGGGTACAATACCGTTGAGTGGGTTCGTTACATTACA
genomic: GTTCCCATGTTCACAGCATCTGGTTTACGTGTCCGTTTCCTCAAGgtacgtatcc ... ctctcttcagGTGTGGGAGAAGAGTGGGTACAATACCGTTGAGTGGGTTCGTTACATTACA
EST: gi|209699280|gb|BW670242.1|BW670242
EST:     GTTCCCATGTTCACAGCATCTGGTTTACGTGTCCGTTTCCTCAAG                         GTGTGGGAGAAGAGTGGGTACAATACCGTTGAGTGGGTTCGTTACATTACA
genomic: GTTCCCATGTTCACAGCATCTGGTTTACGTGTCCGTTTCCTCAAGgtacgtatcc ... ctctcttcagGTGTGGGAGAAGAGTGGGTACAATACCGTTGAGTGGGTTCGTTACATTACA
EST: gi|16342565|gb|BI968160.1|BI968160
EST:     GTTCCCATGTTCACAGCATCTGGTTTACGTGTCCGTTTCCTCAAG                         GTGTGGGAGAAGAGTGGGTACAATACCGTTGAGTGGGTTCGTTACATTACA
genomic: GTTCCCATGTTCACAGCATCTGGTTTACGTGTCCGTTTCCTCAAGgtacgtatcc ... ctctcttcagGTGTGGGAGAAGAGTGGGTACAATACCGTTGAGTGGGTTCGTTACATTACA