1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
TGTAACTGGACTAAGCAATGGCTCATTGACTGGATCATTGCTACCTAATTCTTCATCATCTTCTCAATTGGCTAATAAAGAGTCTCCCCTGATGGAAGAGgtaggttaggtgataggcattaatagttctgtagattacatatatgcatactgtatatagtatatactatatcctatgtgtctgctgagtgtagagatgc...
species | Glycine max |
transcript | GLYMA17G09080.1 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: CTTCATCATCTTCTCAATTGGCTAATAAAGAGTCTCCCCTGATGGAAGAG GTACTAGTTATTGCACGAGGACAACTTTAAATCATGCATCAACTAGACACTEST: gi|16343156|gb|BI968751.1|BI968751
genomic: CTTCATCATCTTCTCAATTGGCTAATAAAGAGTCTCCCCTGATGGAAGAGgtaggttagg ... ttcaaaatagGTACTAGTTATTGCACGAGGACAACGTCAAATCATGCATCAACTAGACACT
EST: CTTCATCATCTTCTCAATTGGCTAATAAAGAGTCTCCCCTGATGGAAGAG GTACTAGTTATTGCACGAGGACAACGTCAAATCATGCATCAACTAGACACTEST: gi|7458576|gb|AW666026.1|AW666026
genomic: CTTCATCATCTTCTCAATTGGCTAATAAAGAGTCTCCCCTGATGGAAGAGgtaggttagg ... ttcaaaatagGTACTAGTTATTGCACGAGGACAACGTCAAATCATGCATCAACTAGACACT
EST: CTTCATCATCTTCTCAATTGGCTAATAAAGAGTCTCCCCTGATGGAAGAG GTACTAGTTATTGCACGAGGACAACGTCAAATCATGCATCAACTAGACACTEST: gi|33387279|gb|CA850486.1|CA850486
genomic: CTTCATCATCTTCTCAATTGGCTAATAAAGAGTCTCCCCTGATGGAAGAGgtaggttagg ... ttcaaaatagGTACTAGTTATTGCACGAGGACAACGTCAAATCATGCATCAACTAGACACT
EST: CTTCATCATCTTCTCAATTGGCTAATAAAGAGTCTCCCCTGATGGAAGAG GTACTAGTTATTGCACGAGGACAACGTCAAATCATGCATCAACTAGACACTEST: gi|9899178|gb|BE608205.1|BE608205
genomic: CTTCATCATCTTCTCAATTGGCTAATAAAGAGTCTCCCCTGATGGAAGAGgtaggttagg ... ttcaaaatagGTACTAGTTATTGCACGAGGACAACGTCAAATCATGCATCAACTAGACACT
EST: CTTCATCATCTTCTCAATTGGCTAATAAAGAGTCTCCCCTGATGGAAGAG GTACTAGTTATTGCACGAGGACAACGTCAAATCATGCATCAACTAGACACTEST: gi|51335091|gb|CO978957.1|CO978957
genomic: CTTCATCATCTTCTCAATTGGCTAATAAAGAGTCTCCCCTGATGGAAGAGgtaggttagg ... ttcaaaatagGTACTAGTTATTGCACGAGGACAACGTCAAATCATGCATCAACTAGACACT
EST: CTTCATCATCTTCTCAATTGGCTAATAAAGAGTCTCCCCTGATGGAAGAG GTACTAGTTATTGCACGAGGACAACGTCAAATCATGCATCAACTAGACACTEST: gi|6725297|gb|AW309696.1|AW309696
genomic: CTTCATCATCTTCTCAATTGGCTAATAAAGAGTCTCCCCTGATGGAAGAGgtaggttagg ... ttcaaaatagGTACTAGTTATTGCACGAGGACAACGTCAAATCATGCATCAACTAGACACT
EST: TCAATTGGCTAATACAGAGTCTCCCCTGATGGAAGAG GTACTAGTTATTGCACGAGGACAACGTCAAATCATGCATCAACTAGACACTEST: gi|7795111|gb|AW780508.1|AW780508
genomic: TCAATTGGCTAATAAAGAGTCTCCCCTGATGGAAGAGgtaggttagg ... ttcaaaatagGTACTAGTTATTGCACGAGGACAACGTCAAATCATGCATCAACTAGACACT
EST: CTTCATCATCTTCTCAATTGGCTAATAAAGAGTCTCCCCTGATGGAAGAG GTACTAGTTATTGCACGAGGACAACGTCAAATCATGCATCAACTAGACACT
genomic: CTTCATCATCTTCTCAATTGGCTAATAAAGAGTCTCCCCTGATGGAAGAGgtaggttagg ... ttcaaaatagGTACTAGTTATTGCACGAGGACAACGTCAAATCATGCATCAACTAGACACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGTAACTGGACTAAGCAATGGCTCATTGACTGGATCATTGCTACCTAATTCTTCATCATCTTCTCAATTGGCTAATAAAGAGTCTCCCCTGATGGAAGAGgtaggttaggtgataggcattaatagttctgtagattacatatatgcatactgtatatagtatatactatatcctatgtgtctgctgagtgtagagatgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA