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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGTCTGGTTTGATGGAAGAAGAGAGGTTCATATTCACCCTTCTTCTATCAACAATAACTCAAAAGGATTCCAGTACCCCTTTCTTGTCTTCCTTGAAAAGgtctgtgaatagctttttccatggaagtttgctaattctgtttagcttgtaatttcttctgtcacacaatttggaactttattactattaaagatatgat...

Basic information

species Glycine max
transcript GLYMA17G00440.1
intron # 11
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA17G00440.1 (Glycine max), 5'ss of exon 11
lower sequence: Vv12s0035g00800.t01 (Vitis vinifera), 5'ss of exon 29
AGTCTGGTTTGATGGAAGAAGAGAGGTTCATATTCACCCTTCTTCTATCAACAATAACTCAAAAGGATTCCAGTACCCCTTTCTTGTCTTCCTTGAAAAGgtctgtgaatagctttttccatggaagtttgctaattctgtttagcttgtaatttcttctgtcacaca---atttg--gaactttattactattaaagatatgat
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AGTCTGGTATGATGGAAGAAGAGAAGTTCACATACATCCTTCTTCTATCAATGGTAACTTGAATGCTTTTCAGTACCCATTCCTCGTCTTCCTCGAAAAGgttggcatgct-tttatcccatggaattacttcagtctttttc--cctatcatttgcaaaaattcacatttatttactgaactatgacaatgttctaaa-ataa-