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GTAGGGCTCCTAATTCTAAGAGGCTGAATTTAGAAACTGTAGGTGTTGAGCTTGACAACACTGGAGCAATAAAGgttcacatttctctgctttaatcacctgattccatgaaatctaataagaaaaaagttattctcatttcagcatctggatgataggtggatccattgtgat...
species | Glycine max |
transcript | GLYMA16G27210.1 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: TGAATTTAGAAACTGTAGGTGATGAGCTTGACAACACTGGAGCAATAAAG GTGGATGAGTATTCCCGCACAAGCATACCTAGCATATGGGCTGTGGGTGATEST: gi|21256789|gb|BQ453677.1|BQ453677
genomic: TGAATTTAGAAACTGTAGGTGTTGAGCTTGACAACACTGGAGCAATAAAGgttcacattt ... ttgtgtttagGTGGATGAGTATTCCCGCACAAGCATACCTAGCATATGGGCTGTGGGTGAT
EST: TGAATTTAGAAACTGTAGGTGTTGAGCTTGACAACACTGGAGCAATAAAG GTGGATGAGTATTCCCGCACAAGCATACCTAGCATATGGGCTGTGGGTGATEST: gi|11412011|gb|BF424022.1|BF424022
genomic: TGAATTTAGAAACTGTAGGTGTTGAGCTTGACAACACTGGAGCAATAAAGgttcacattt ... ttgtgtttagGTGGATGAGTATTCCCGCACAAGCATACCTAGCATATGGGCTGTGGGTGAT
EST: TGAATTTAGAAACTGTAGGTGTTGAGCTTGACAACACTGGAGCAATAAAG GTGGATGAGTATTCCCGCACAAGCATACCTAGCATATGGGCTGTGGGTGATEST: gi|15202278|gb|BI425317.1|BI425317
genomic: TGAATTTAGAAACTGTAGGTGTTGAGCTTGACAACACTGGAGCAATAAAGgttcacattt ... ttgtgtttagGTGGATGAGTATTCCCGCACAAGCATACCTAGCATATGGGCTGTGGGTGAT
EST: CAACACTGGAGCAATAAAG GTGGATGAGTATTCCCGCACAAGCATACCTAGCATATGGGCTGTGGGTGATEST: gi|254323261|gb|GR840066.1|GR840066
genomic: CAACACTGGAGCAATAAAGgttcacattt ... ttgtgtttagGTGGATGAGTATTCCCGCACAAGCATACCTAGCATATGGGCTGTGGGTGAT
EST: TGAATTTAGAAACTGTAGGTGTTGAGCTTGACAACACTGGAGCAATAAAG GTGGATGAGTATTCCCGCACAAGCATACCTAGCATATGGGCTGTGGGTGATEST: gi|8670051|gb|BE191158.1|BE191158
genomic: TGAATTTAGAAACTGTAGGTGTTGAGCTTGACAACACTGGAGCAATAAAGgttcacattt ... ttgtgtttagGTGGATGAGTATTCCCGCACAAGCATACCTAGCATATGGGCTGTGGGTGAT
EST: TGAATTTAGAAACTGTAGGTGTTGAGCTTGACAACACTGGAGCAATAAAG GTGGATGAGTATTCCCGCACAAGCATACCTAGCATATGGGCTGTGGGTGATEST: gi|14012095|gb|BG727026.1|BG727026
genomic: TGAATTTAGAAACTGTAGGTGTTGAGCTTGACAACACTGGAGCAATAAAGgttcacattt ... ttgtgtttagGTGGATGAGTATTCCCGCACAAGCATACCTAGCATATGGGCTGTGGGTGAT
EST: TGAATTTAGAAACTGTAGGTGTTGAGCTTGACAACACTGGAGCAATAAAG GTGGATGAGTATTCCCGCACAAGCATACCTAGCATATGGGCTGTGGGTGATEST: gi|7589454|gb|AW705228.1|AW705228
genomic: TGAATTTAGAAACTGTAGGTGTTGAGCTTGACAACACTGGAGCAATAAAGgttcacattt ... ttgtgtttagGTGGATGAGTATTCCCGCACAAGCATACCTAGCATATGGGCTGTGGGTGAT
EST: TGAATTTAGAAACTGTAGGTGTTGAGCTTGACAACACTGGAGCAATAAAG GTGGATGAGTATTCCCGCACAAGCATACCTAGCATATGGGCTGTGGGTGAT
genomic: TGAATTTAGAAACTGTAGGTGTTGAGCTTGACAACACTGGAGCAATAAAGgttcacattt ... ttgtgtttagGTGGATGAGTATTCCCGCACAAGCATACCTAGCATATGGGCTGTGGGTGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTAGGGCTCCTAATTCTAAGAGGCTGAATTTAGAAACTGTAGGTGTTGAGCTTGACAACACTGGAGCAATAAAGgttcacatttctctgctttaatcacctgattccatgaaatctaataagaaaaaagttattctcatttcagcatctggatgataggtggatccattgtgat
- - - - - - - - - - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - agaaaaaa