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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TATTCTTGTAAGAACTACAGAATGGGAAAGAATCAAAGCTAATATGCCATGGTTATTGGATGCCGTAATTTGCGTGGCATTGGACTTCTTCgtatcctatacatgcatttcttgatgcagattattgttttgatcgtgttcatctaactatttagttatatactattgaagaaaaaccaaaactttaacaatatatgatag

Basic information

species Glycine max
transcript GLYMA16G25700.1
intron # 11
splice site 5'
intron type U12 (go to U12 genes for details)

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|51337376|gb|CO981242.1|CO981242
EST:     ATATGCCATGGTTATTGGATGCCGTAATTTGCGTGGCATTGGACTTCTTC                         ATAATATCTCAGTATATCTACTATAGATGCTTTCAAAGGAGAGAAGCACGT
genomic: ATATGCCATGGTTATTGGATGCCGTAATTTGCGTGGCATTGGACTTCTTCgtatcctata ... tatatgatagATAATATCTCAGTATATCTACTATAGATGCTTTCAAAGGAGAGAAGCACGT