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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATGGACTAGGAGCGAAAAATGGAGAACCTCTGAAAGTTGATATTACTGGTTTTGGGTTGCATCTATGTACACTTGTTCATGCTCAAGTGAATGGTAACTGgtattgtcattatcccatatagcatcgtcattaattggtttagttttcttttgataatgtttctcatgactaattgaatctgtttagcattgtggggtgg...

Basic information

species Glycine max
transcript GLYMA16G09740.1
intron # 11
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA16G09740.1 (Glycine max), 5'ss of exon 11
lower sequence: AT3G07400.1 (Arabidopsis thaliana), 5'ss of exon 10
ATGGACTAGGAGCGAAAAATGGAGAACCTCTGAAAGTTGATATTACTGGTTTTGGGTTGCATCTATGTACACTTGTTCATGCTCAAGTGAATGGTAACTGgtattgtcattatcccatatagcatcgtcattaattggtttagttttcttttgataatgtttctcatgactaattgaatctgtttagcattgtggggtgg
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GCGTTCCGGGTGATAAGAATGCAGAACTTCTAAAGGTTGATATCACTGGATTTGGCTTGCATTTGTGTTCTTTTGTACATGCACAAGTGAATGGCAACTGgtatgacgctttttctttctt---ttctgattgat-gacctatatatgtgatacaattgttaagtatcagtaatgatctctctctag-------------