1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GTCATTCATTAAATTTGGTCCTGAATACTTCAAGTACCTTTCTGAATCCATAGGCACCGGAAGTCCAACTTGCCTGGCAAAGATTCTTGGCATATACCAGgtactggtcttctgagccttacattttctttttcttttgttttttggacctcaaatgtcatagcttctaaattactggtgaaaatgaaaacctgttgagt...
species | Glycine max |
transcript | GLYMA16G01590.1 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: TAGGCACCGGAAGTCCAACTTGCCTGGCAAAGATTCTTGGCATATACCAG GTTACATCAAAGCATCTTAAAGGAGGGAAGGAATCAAGGATGGATGTTTTGEST: gi|22930829|gb|BU547976.1|BU547976
genomic: TAGGCACCGGAAGTCCAACTTGCCTGGCAAAGATTCTTGGCATATACCAGgtactggtct ... tgttcgaaagGTTACATCAAAGCATCTTAAAGGAGGGAAGGAATCAAGGATGGATGTTTTG
EST: TGGCAAAGATTCTTGGCATATACCAG GTTACATCAAAGCATCTTAAAGGAGGGAAGGAATCAAGGATGGATGTTTTGEST: gi|20814476|gb|BQ298954.1|BQ298954
genomic: TGGCAAAGATTCTTGGCATATACCAGgtactggtct ... tgttcgaaagGTTACATCAAAGCATCTTAAAGGAGGGAAGGAATCAAGGATGGATGTTTTG
EST: TAGGCACCGGAAGTCCAACTTGCCTGGCAAAGATTCTTGGCATATACCAG GTTACATCAAAGCATCTTAAAGGAGGGAAGGAATCAAGGATGGATGTTTTGEST: gi|18733852|gb|BM527848.1|BM527848
genomic: TAGGCACCGGAAGTCCAACTTGCCTGGCAAAGATTCTTGGCATATACCAGgtactggtct ... tgttcgaaagGTTACATCAAAGCATCTTAAAGGAGGGAAGGAATCAAGGATGGATGTTTTG
EST: TAGGCACTGGAAGTCCGACTTGCCTGGCAAAGATTCTTGGCATATACCAG GTTACATCAAAGCATCTTAAAGGAGGGAAGGAATCAAGGATGGATGTTTTGEST: gi|22523323|gb|BU082134.1|BU082134
genomic: TAGGCACCGGAAGTCCAACTTGCCTGGCAAAGATTCTTGGCATATACCAGgtactggtct ... tgttcgaaagGTTACATCAAAGCATCTTAAAGGAGGGAAGGAATCAAGGATGGATGTTTTG
EST: TAGGCACCGGAAGTCCAACTTGCCTGGCAAAGATTCTTGGCATATACCAG GTTACATCAAAGCATCTTAAAGGAGGGAAGGAATCAAGGATGGATGTTTTGEST: gi|22523233|gb|BU082044.1|BU082044
genomic: TAGGCACCGGAAGTCCAACTTGCCTGGCAAAGATTCTTGGCATATACCAGgtactggtct ... tgttcgaaagGTTACATCAAAGCATCTTAAAGGAGGGAAGGAATCAAGGATGGATGTTTTG
EST: TAGGCACCGGAAGTCCAACTTGCCTGGCAAAGATTCTTGGCATATACCAG GTTACATCAAAGCATCTTAAAGGAGGGAAGGAATCAAGGATGGATGTTTTG
genomic: TAGGCACCGGAAGTCCAACTTGCCTGGCAAAGATTCTTGGCATATACCAGgtactggtct ... tgttcgaaagGTTACATCAAAGCATCTTAAAGGAGGGAAGGAATCAAGGATGGATGTTTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCATTCATTAAATTTGGTCCTGAATACTTCAAGTACCTTTCTGAATCCATAGGCACCGGAAGTCCAACTTGCCTGGCAAAGATTCTTGGCATATACCAGgtactggtcttctgagccttacattttctttttcttttgttttttggacctcaaatgtcatagcttctaaattactggtgaaaatgaaaacctgttgagt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaaaatga