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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAACAGGCTAAGAGAACTTGCTGAGAACAATGATCATCATCATTCGATGTTTAGTAGCTATGGTAGCCCATACAATCAGAGCCAAGTTTCTCTTCAGCCGgtaaggttctttcagttcatgtaggaattattaaaggatatttacaagagattttatgaaactttcgttttggtaaacaacttaactaactgcttattga...

Basic information

species Glycine max
transcript GLYMA14G18380.1
intron # 11
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|5753346|gb|AI960633.1|AI960633
EST:     TTAGTAGCTATGGTAGCCCATACAATCAGAGCCAAGTTTCTCTTCAGCCG                         GATGGAGCCAGTTCTCCACTTCCCTATTCTGGGTAGAGCACAAGAAACGCA
genomic: TTAGTAGCTATGGTAGCCCATACAATCAGAGCCAAGTTTCTCTTCAGCCGgtaaggttct ... ccttttgcagGATGGAGCCAGTTCTCCACTTCCCTATTCTGGGTAGAGCACAAGAAACGCA
EST: gi|26048886|gb|CA785339.1|CA785339
EST:     TTAGTAGCTATGGTAGCCCATACAATCAGAGCCAAGTTTCTCTTCAGCCG                         GATGGAGCCAGTTCTCCACTTCCCTATTCTGGGTAGAGCACAAGAAACGCA
genomic: TTAGTAGCTATGGTAGCCCATACAATCAGAGCCAAGTTTCTCTTCAGCCGgtaaggttct ... ccttttgcagGATGGAGCCAGTTCTCCACTTCCCTATTCTGGGTAGAGCACAAGAAACGCA
EST: gi|193663261|gb|FK604049.1|FK604049
EST:     CAAGTTTCTCTTCAGCCG                         GATGGAGCCAGTTCTCCACTTCCCTATTCTGGGTAGAGCACAAGAAACGCA
genomic: CAAGTTTCTCTTCAGCCGgtaaggttct ... ccttttgcagGATGGAGCCAGTTCTCCACTTCCCTATTCTGGGTAGAGCACAAGAAACGCA