1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
ATGCTGGGATGAAAAACCATACAGAAGGCCAACATTTAGGCAAATAATTGGGAGATTGGAAGACATATACTACCATCTTGCTCAAAAGAGGGGCTGGAAGgtatcccttttttatgtgaatatttcttttatcaatttttagacatagttatgatagtataattttaacttcgcagtaatttttaatagtaaaacttaac...
species | Glycine max |
transcript | GLYMA14G03040.1 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: GGAGATTGGAAGACATATACTACCATCTTGCTCAAAAGAGGGGCTGGAAG GTTAGGACTCCTGGATGCTTCCAGAACCTGGAAGCCATATTTAGGGGTAATEST: gi|9902790|gb|BE611758.1|BE611758
genomic: GGAGATTGGAAGACATATACTACCATCTTGCTCAAAAGAGGGGCTGGAAGgtatcccttt ... tgatacacagGTTAGGACTCCTGGATGCTTCCAGAACCTGGAAGCCATATTTAGGGGTAAT
EST: GGAGATTGGAAGACATATACTACCATCTTGCTCAAAAGAGGGGCTGGAAG GTTAGGACTCCTGGATGCTTCCAGAACEST: gi|21600290|gb|BQ610621.1|BQ610621
genomic: GGAGATTGGAAGACATATACTACCATCTTGCTCAAAAGAGGGGCTGGAAGgtatcccttt ... tgatacacagGTTAGGACTCCTGGATGCTTCCAGAAC
EST: GGAGATTGGAAGACATATACTACCATCTTGCTCAAAAGAGGGGCTGGAAG GTTAGGACTCCTGGATGCTTCCAGAACCTGGAAGCCATATTTAGGGGTAATEST: gi|13481235|gb|BG510578.1|BG510578
genomic: GGAGATTGGAAGACATATACTACCATCTTGCTCAAAAGAGGGGCTGGAAGgtatcccttt ... tgatacacagGTTAGGACTCCTGGATGCTTCCAGAACCTGGAAGCCATATTTAGGGGTAAT
EST: GGAGATTGGAAGACATATACTACCATCTTGCTCAAAAGAGGGGCTGGAAG GTTAGGACTCCTGGATGCTTCCAGAACCTGGAAGCCATATTTAGGGGTAAT
genomic: GGAGATTGGAAGACATATACTACCATCTTGCTCAAAAGAGGGGCTGGAAGgtatcccttt ... tgatacacagGTTAGGACTCCTGGATGCTTCCAGAACCTGGAAGCCATATTTAGGGGTAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGCTGGGATGAAAAACCATACAGAAGGCCAACATTTAGGCAAATAATTGGGAGATTGGAAGACATATACTACCATCTTGCTCAAAAGAGGGGCTGGAAGgtatcccttttttatgtgaatatttcttttatcaatttttagacatagttatgatagtataattttaacttcgcagtaatttttaatagtaaaacttaac
- - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG