1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
GTAATTTATGGCGTGAATTGTGGGAAACATCCAAACCAGTACCTGCTGTTAAGCAGGCGCCTCTGTTTGATGAGGATTTGGCAGTgtaagttggtgatgaagattttttgcattaatttatatatttcaaccctaaagccatctcttgaatcccatgttgcattcatttatag
species | Glycine max |
transcript | GLYMA14G02550.1 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: GGATTTGGCAGG GGAGGGCATCCTCAAAGCATTTGAAGAAATGCATCCATCTGATCTTTTTGGEST: gi|58022233|gb|CX708974.1|CX708974
genomic: GGATTTGGCAGTgtaagttggt ... tcatttatagGGAGGGCATCCTCAATGCATTTGAAGAAATGCATCCATCTGATCTTTTTGG
EST: TAAGCAGGCGCCTCTGTTTGATGAGGATTTGGCAGT GGAGGGCATCCTCAATGCATTTGAAGAAATGCATCCATCTGATCTTTTTGGEST: gi|21256661|gb|BQ453549.1|BQ453549
genomic: TAAGCAGGCGCCTCTGTTTGATGAGGATTTGGCAGTgtaagttggt ... tcatttatagGGAGGGCATCCTCAATGCATTTGAAGAAATGCATCCATCTGATCTTTTTGG
EST: CCAGTACCTGCTGTTAAGCAGGCGCCTCTGTTTGATGAGGATTTGGCAGT GGAGGGCATCCTCAATGCATTTGAAGAAATGCATCCATCTGATCTTTTTGG
genomic: CCAGTACCTGCTGTTAAGCAGGCGCCTCTGTTTGATGAGGATTTGGCAGTgtaagttggt ... tcatttatagGGAGGGCATCCTCAATGCATTTGAAGAAATGCATCCATCTGATCTTTTTGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTAATTTATGGCGTGAATTGTGGGAAACATCCAAACCAGTACCTGCTGTTAAGCAGGCGCCTCTGTTTGATGAGGATTTGGCAGTgtaagttggtgatgaagattttttgcattaatttatatatttcaaccctaaagccatctcttgaatcccatgttgcattcatttatag
- - - - - - - - - - - - - - - - - - - - - - GCTGTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT