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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGATTTCTTAAATGCTCCTAATGGACTACCAAAGCAATCTCTCACTGGCAATGAAAGAGTTGAAAGTGATCCTTCACAATCTCCATTGGTTGGGAAAATGgtatggaagattattaaattttcatactttattccctatgtcaaactgccttctgaaattaatgagtttggtacttgcag

Basic information

species Glycine max
transcript GLYMA13G00980.1
intron # 11
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|10236681|gb|BE805569.1|BE805569
EST:     GAGTTGAAAGTGATCCTTCACAATCTCCATTGGTTGGGAAAATG                         GACGTATTTGACCTTCCTTTTCACATGGCCAGAGATCAAATAGAAGAAAGT
genomic: GAGTTGAAAGTGATCCTTCACAATCTCCATTGGTTGGGAAAATGgtatggaaga ... gtacttgcagGACGTATTTGACCTTCCTTTTCACATGGCCAGAGATCAAATAGAAGAAAGT
EST: gi|51344846|gb|CO985579.1|CO985579
EST:     ATGAAAGAGTTGAAAGTGATCCTTCACAATCTCCATTGGTTGGGAAAATG                         GACGTATTTGACCTTCCTTTTCACATGGCCAGAGATCAAATAGAAGAAAGT
genomic: ATGAAAGAGTTGAAAGTGATCCTTCACAATCTCCATTGGTTGGGAAAATGgtatggaaga ... gtacttgcagGACGTATTTGACCTTCCTTTTCACATGGCCAGAGATCAAATAGAAGAAAGT