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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTGCTGGGTTGTGGCATTTCATATATCGCAGCATTTATCTGGATCAATATATATCTTCAGAGTTCTCATCACCAATTAACACTCCTAAGCAGCAGAAAAGgtagcgatgttgctgtagcttttttttaatgcatttttgttattgtcagcaatataacctgcctccgttgttgcag

Basic information

species Glycine max
transcript GLYMA12G29450.3
intron # 11
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA12G29450.3 (Glycine max), 5'ss of exon 11
lower sequence: Vv06s0004g02820.t01 (Vitis vinifera), 5'ss of exon 11
TTGCTGGGTTGTGGCATTTCATATATCGCAGCATTTATCTGGATCAATATATATCTTCAGAGTTCTCATCACCAATTAACACTCCTAAGCAGCAGAAAAGgtagcgatgttg-----ctgt---agctttttttta-atgcatttttg-ttattgtcagcaat--ataacctgcctccgttgttgcag------------------------------
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CTTTTGGACTTTGGCATTTCATATATCGCAGCATATATCTGGATCAGTATGTATCTTCGGAGTTCTCACCACCAATTAACAGTTCCAGACAGCAGAAAAGgtaaaagtgttaaatctttgtgtcaacttcactggacatgagttctgggttcttttctgttgtctatgtcttttctgctttgttgctgtcaggaaaataacaagttcctcttttgcag