1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GTCTTTCAGAAACGTTTACCCCCAGAAGCAGTGGACCTTGTCTGTAGGTTCTTTCAGTACTCCCCCAATTTGAGATGCACTGCAgtaagttgaatgtctccattttttatttacttttctcaccttggatattataaaattattttactcatgatattatggcactgcag
species | Glycine max |
transcript | GLYMA12G28730.1 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: ACCTTGTCTGTAGGTTCTTTCAGTACTCTCCCAATTTGAGATGCACTGCA TTGGAAGCTTGCATTCATCCATTTTTTGATGAATTGAGGGACCCAAACACCEST: gi|6719212|gb|AW306859.1|AW306859
genomic: ACCTTGTCTGTAGGTTCTTTCAGTACTCCCCCAATTTGAGATGCACTGCAgtaagttgaa ... ggcactgcagTTGGAAGCTTGCATTCATCCATTTTTTGATGAATTGAGGGACCCAAACACC
EST: ACCTTGTCTGTAGGTTCTTTCAGTACTCCCCCAATTTGAGATGCACTGCA TTGGAAGCTTGCATTCATCCATTTTTTGATGAATTGAGGGACCCAAACACCEST: gi|151408852|gb|EV278660.1|EV278660
genomic: ACCTTGTCTGTAGGTTCTTTCAGTACTCCCCCAATTTGAGATGCACTGCAgtaagttgaa ... ggcactgcagTTGGAAGCTTGCATTCATCCATTTTTTGATGAATTGAGGGACCCAAACACC
EST: ACCTTGTCTGTAGGTTCTTTCAGTACTCCCCCAATTTGAGATGCACTGCA TTGGAAGCTTGCATTCATCCATTTTTTGATGAATTGAGGGACCCAAACACCEST: gi|9903227|gb|BE612195.1|BE612195
genomic: ACCTTGTCTGTAGGTTCTTTCAGTACTCCCCCAATTTGAGATGCACTGCAgtaagttgaa ... ggcactgcagTTGGAAGCTTGCATTCATCCATTTTTTGATGAATTGAGGGACCCAAACACC
EST: ACCTTGTTTGTAGGTTCTTTCAATACTCCCCCAATTTGAGATGCACTGCA TTGGAAGCTTGCATTCATCCATTTTTTGATGAATTGAGGGACCCAAACACCEST: gi|13312538|gb|BG406189.1|BG406189
genomic: ACCTTGTCTGTAGGTTCTTTCAGTACTCCCCCAATTTGAGATGCACTGCAgtaagttgaa ... ggcactgcagTTGGAAGCTTGCATTCATCCATTTTTTGATGAATTGAGGGACCCAAACACC
EST: ACCTTGTCTGTAGGTTCTTTCAGTACTCCCCCAATTTGAGATGCACTGCA TTGGAAGCTTGCATTCATCCATTTTTTGATGAATTTGAGGGACCCAAAEST: gi|13479623|gb|BG508966.1|BG508966
genomic: ACCTTGTCTGTAGGTTCTTTCAGTACTCCCCCAATTTGAGATGCACTGCAgtaagttgaa ... ggcactgcagTTGGAAGCTTGCATTCATCCATTTTTTGATGAATT-GAGGGACCCAAA
EST: ACCTTGTCTGTAGGTTCTTTCAGTACTCTCCCAATTTGAGATGCACTGCA TTGGAAGCTTGCATTCATCCATTTTTTGATGAATTGAGGGACCCAAACACCEST: gi|7589778|gb|AW705545.1|AW705545
genomic: ACCTTGTCTGTAGGTTCTTTCAGTACTCCCCCAATTTGAGATGCACTGCAgtaagttgaa ... ggcactgcagTTGGAAGCTTGCATTCATCCATTTTTTGATGAATTGAGGGACCCAAACACC
EST: ACCTTGTCTGTAGGTTCTTTCAGTACTCTCCCAATTTGAGATGCACTGCA TTGGAAGCTTGCATTCATCCATTTTTTGATGAATTGAGGGACCCAAACACC
genomic: ACCTTGTCTGTAGGTTCTTTCAGTACTCCCCCAATTTGAGATGCACTGCAgtaagttgaa ... ggcactgcagTTGGAAGCTTGCATTCATCCATTTTTTGATGAATTGAGGGACCCAAACACC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCTTTCAGAAACGTTTACCCCCAGAAGCAGTGGACCTTGTCTGTAGGTTCTTTCAGTACTCCCCCAATTTGAGATGCACTGCAgtaagttgaatgtctccattttttatttacttttctcaccttggatattataaaattattttactcatgatattatggcactgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG