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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCGAATTTACTATGATTGAACTTGCTGAGAATGTGAAAGAGgttagttgtaacttgcaaaccatttcaattcttggagaatccccacatctcccttctgtgttagtctggttatattttaactgtaagctttgaacaaaag...

Basic information

species Glycine max
transcript GLYMA12G06980.2
intron # 11
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209714718|gb|BW674256.1|BW674256
EST:     ATGATTGAACTTGCTGAGAATGTGAAAGAG                         CTTATTAATCCAAAAGTGGAGATAAATATGGTTGAGAACACTCCTGACGAT
genomic: ATGATTGAACTTGCTGAGAATGTGAAAGAGgttagttgta ... ggttttgcagCTTATTAATCCAAAAGTGGAGATAAATATGGTTGAGAACACTCCTGACGAT
EST: gi|193521072|gb|FK478125.1|FK478125
EST:     GCGAATTTACTATGATTGAACTTGCTGAGAATGTGAAAGAG                         CTTATTAATCCAAAAGTGGAGATAAATATGGTTGAGAACACTCCTGACGAT
genomic: GCGAATTTACTATGATTGAACTTGCTGAGAATGTGAAAGAGgttagttgta ... ggttttgcagCTTATTAATCCAAAAGTGGAGATAAATATGGTTGAGAACACTCCTGACGAT
EST: gi|193616842|gb|FK571596.1|FK571596
EST:     GAATTTACTATGATTGAACTTGCTGAGAATGTGAAAGAG                         CTTATTAATCCAAAAGTGGAGATAAATATGGTTGAGAACACTCCTGACGAT
genomic: GAATTTACTATGATTGAACTTGCTGAGAATGTGAAAGAGgttagttgta ... ggttttgcagCTTATTAATCCAAAAGTGGAGATAAATATGGTTGAGAACACTCCTGACGAT
EST: gi|214004740|gb|DB985629.1|DB985629
EST:     ATTTACTATGATTGAACTTGCTGAGAATGTGAAAGAG                         CTTAATAATCCAAAAGTGGAGATAAATATGGTTGAGAACACTCCTGACGAT
genomic: ATTTACTATGATTGAACTTGCTGAGAATGTGAAAGAGgttagttgta ... ggttttgcagCTTATTAATCCAAAAGTGGAGATAAATATGGTTGAGAACACTCCTGACGAT
EST: gi|208182321|gb|GD980334.1|GD980334
EST:     GCGAATTTACTATGATTGAACTTGCTGAGAATGTGAAAGAG                         CTTATTAATCCAAAAGTGGAGATAAATATGGTTGAGAACACTCCTGACGAT
genomic: GCGAATTTACTATGATTGAACTTGCTGAGAATGTGAAAGAGgttagttgta ... ggttttgcagCTTATTAATCCAAAAGTGGAGATAAATATGGTTGAGAACACTCCTGACGAT
EST: gi|208205622|gb|GE006621.1|GE006621
EST:     GCGAATTTACTATGATTGAACTTGCTGAGAATGTGAAAGAG                         CTTATTAATCCAAAAGTGGAGATAAATATGGTTGAGAACACTCCTGACGAT
genomic: GCGAATTTACTATGATTGAACTTGCTGAGAATGTGAAAGAGgttagttgta ... ggttttgcagCTTATTAATCCAAAAGTGGAGATAAATATGGTTGAGAACACTCCTGACGAT
EST: gi|209703510|gb|BW656548.1|BW656548
EST:     GCGAATTTACTATGATTGAACTTGCTGAGAATGTGAAAGAG                         CTTATTAATCCAAAAGTGGAGATAAATATGGTTGAGAACACTCCTGACGAT
genomic: GCGAATTTACTATGATTGAACTTGCTGAGAATGTGAAAGAGgttagttgta ... ggttttgcagCTTATTAATCCAAAAGTGGAGATAAATATGGTTGAGAACACTCCTGACGAT