Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTCCGTGTACAGTCAGACCCTGCAGGACGCCTAGTCATAAGTGGGGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTCAAAAAGgtatgttttcattttcttcaacaatgaaaagaatgcgtctttctttgaaatttttcaacacaactgctattgtttaaactttcaacttgcagatatgtat...

Basic information

species Glycine max
transcript GLYMA11G09370.2
intron # 11
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193710860|gb|FK647347.1|FK647347
EST:     GGGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTCAAAAAG                         GTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
genomic: GGGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTCAAAAAGgtatgttttc ... atgaattcagGTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
EST: gi|23730833|gb|BU763521.1|BU763521
EST:     GGGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTCAAAAAG                         GTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
genomic: GGGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTCAAAAAGgtatgttttc ... atgaattcagGTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
EST: gi|207710244|gb|GD689710.1|GD689710
EST:     CACCTTTCAAAAAG                         GTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
genomic: CACCTTTCAAAAAGgtatgttttc ... atgaattcagGTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
EST: gi|193547493|gb|FK501430.1|FK501430
EST:     GGGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTCAAAAAG                         GTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
genomic: GGGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTCAAAAAGgtatgttttc ... atgaattcagGTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
EST: gi|193541489|gb|FK499185.1|FK499185
EST:     GGGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTCAAAAAG                         GTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
genomic: GGGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTCAAAAAGgtatgttttc ... atgaattcagGTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
EST: gi|193706504|gb|FK642273.1|FK642273
EST:     GGGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTCAAAAAG                         GTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
genomic: GGGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTCAAAAAGgtatgttttc ... atgaattcagGTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
EST: gi|9820048|gb|BE555561.1|BE555561
EST:     GGGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTCAAAAAG                         GTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
genomic: GGGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTCAAAAAGgtatgttttc ... atgaattcagGTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
EST: gi|208154105|gb|GD954402.1|GD954402
EST:     GGGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTCAAAAAG                         GTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
genomic: GGGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTCAAAAAGgtatgttttc ... atgaattcagGTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
EST: gi|193635471|gb|FK584824.1|FK584824
EST:     GGGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTCAAAAAG                         GTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGG
genomic: GGGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTCAAAAAGgtatgttttc ... atgaattcagGTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGG
EST: gi|208165847|gb|GD964185.1|GD964185
EST:     GGGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTCAAAAAG                         GTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
genomic: GGGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTCAAAAAGgtatgttttc ... atgaattcagGTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
EST: gi|4288246|gb|AI441305.1|AI441305
EST:     GGAGCCTGAGCATCCCAACAATCCTTTGGGGTGTGACACCTTT-AAAAAG                         GTTGTCAGCTTGCCCTC
genomic: GGAGCCTGAGCATCCCAACAATCCTT-GGGGTGTGACACCTTTCAAAAAGgtatgttttc ... atgaattcagGTTGTCAGCTTGCCCTC
EST: gi|207719655|gb|GD702154.1|GD702154
EST:     GGGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTCAAAAAG                         GTTGACAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
genomic: GGGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTCAAAAAGgtatgttttc ... atgaattcagGTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
EST: gi|193371198|gb|FK336851.1|FK336851
EST:     GGGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTC-AAAAG                         GTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
genomic: GGGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTCAAAAAGgtatgttttc ... atgaattcagGTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
EST: gi|208073736|gb|GD869053.1|GD869053
EST:     ACACCTTTCAAAAAG                         GTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
genomic: ACACCTTTCAAAAAGgtatgttttc ... atgaattcagGTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
EST: gi|193389319|gb|FK353952.1|FK353952
EST:     GGGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTCAAAAAG                         GTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
genomic: GGGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTCAAAAAGgtatgttttc ... atgaattcagGTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
EST: gi|31464043|gb|CD406071.1|CD406071
EST:     GGGAGCCTGAGCATCCCTACAATCCTTGGGGTGTGACACCTTTCAAAAAG                         TTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
genomic: GGGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTCAAAAAGgtatgttttc ... atgaattcagGTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
EST: gi|207827796|gb|GD800389.1|GD800389
EST:     GGGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTCAAAAAG                         GTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG
genomic: GGGAGCCTGAGCATCCCAACAATCCTTGGGGTGTGACACCTTTCAAAAAGgtatgttttc ... atgaattcagGTTGTCAGCTTGCCCTCAAGAATTGATCCTCATCAGACGTCTGCGGTGGTG