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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATTATTGCAATTGCACTATTTCCTGTTACACCAAGCTTGAGTTGGAGAATATATGCCCAACTTGGCTATTCCAGGGACCAATTTGATGCAGCAACCTGGgtctgtcctctctctcacacacacatatgctcacatacacataaatttttacatatacatgacttacacataattttgaactattctgttctgctgcgtgtcttatttaagctgttttacattgtag

Basic information

species Glycine max
transcript GLYMA10G43550.1
intron # 11
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209711277|gb|BW665329.1|BW665329
EST:     TATATGCCCAACTTGGCTATTCCAGGGACCAATTTGATGCAGCAACCTGG                         AGAGACACCGAGTGGGGTGGGCTTAAGGGTGGCCAAGTCATGGCTCAACCT
genomic: TATATGCCCAACTTGGCTATTCCAGGGACCAATTTGATGCAGCAACCTGGgtctgtcctc ... tacattgtagAGAGACACCGAGTGGGGTGGGCTTAAGGGTGGCCAAGTCATGGCTCAACCT
EST: gi|16343597|gb|BI969199.1|BI969199
EST:     TATATGCCCAACTTGGCTATTCCAGGGACCAATTTGATGCAGCAACCTGG                         AGAGACACCGAGTGGGGTGGGCTTAAGGGTGGCCAAGTCATGGCTCAACCT
genomic: TATATGCCCAACTTGGCTATTCCAGGGACCAATTTGATGCAGCAACCTGGgtctgtcctc ... tacattgtagAGAGACACCGAGTGGGGTGGGCTTAAGGGTGGCCAAGTCATGGCTCAACCT
EST: gi|193558101|gb|FK513310.1|FK513310
EST:     TATATGCCCAACTTGGCTATTCCAGGGACCAATTTGATGCAGCAACCTGG                         AGAGACACCGAGTGGGGTGGGCTTAAGGGTGGCCAAGTCATGGCTCAACCT
genomic: TATATGCCCAACTTGGCTATTCCAGGGACCAATTTGATGCAGCAACCTGGgtctgtcctc ... tacattgtagAGAGACACCGAGTGGGGTGGGCTTAAGGGTGGCCAAGTCATGGCTCAACCT