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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTGGATTTCCACAGgtgggtatttttcatgtccagttgaagtcccaatttgatattattgaacagttgaatatatgaagaaattatcatcattcattttgtatcttgtgaaagt...

Basic information

species Glycine max
transcript GLYMA10G36770.1
intron # 11
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|11274129|gb|BF324497.1|BF324497
EST:     GTTGGATTTCCACAG                         ATGGCAAATGCTGCAGCCATTGCAGCTGCCTTTGGGGGAGGTCTGCCTCCT
genomic: GTTGGATTTCCACAGgtgggtattt ... tcaattatagATGGCAAATGCTGCAGCCATTGCAGCTGCCTTTGGGGGAGGTCTGCCTCCT
EST: gi|18733034|gb|BM527388.1|BM527388
EST:     AGCCAGGGCAGTTGGATTTCCACAG                         ATGGCAAATGCTGCAGCCATTGCAGCTGCCTTTGGGGGAGGTCTGCCTCCT
genomic: AGCCAGGGCAGTTGGATTTCCACAGgtgggtattt ... tcaattatagATGGCAAATGCTGCAGCCATTGCAGCTGCCTTTGGGGGAGGTCTGCCTCCT
EST: gi|11413709|gb|BF425720.1|BF425720
EST:     AGCCAGGGCAGTTGGATTTCCACAG                         ATGGCAAATGCTG
genomic: AGCCAGGGCAGTTGGATTTCCACAGgtgggtattt ... tcaattatagATGGCAAATGCTG