1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
ACCTTCTCTATACACCCGATGCAGATTTTTCTTGCTTTGCAGACCTTGCACTTTCATCTCCAGAGGATTATTACATTGAGGGACAAGGATCATTGCTCCAgtaagtgtttgtaatcttgcacttctaaattttcacttccattcatgagttgtttacctgaaaatattttaaggaaagatttaattaagtgacttgcttg...
species | Glycine max |
transcript | GLYMA10G30220.1 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: TTACATTGAGGGACAAGGATCATTGCTCCA ATGTGTTCTGACGCCAGGAGATCCATACATGCCCTTACCAAATGACGAAATEST: gi|192309148|gb|FG999081.1|FG999081
genomic: TTACATTGAGGGACAAGGATCATTGCTCCAgtaagtgttt ... tatctgtcagATGTGTTCTGACGCCAGGAGATCCATACATGCCCTTACCAAATGACGAAAT
EST: CTTTCATCTCCAGAGGATTATTACATTGAGGGACAAGGATCATTGCTCCA ATGTGTTCTGACGCCAGGAGATCCATACATGCCCTTACCAAATGACGAAATEST: gi|151411529|gb|EV281340.1|EV281340
genomic: CTTTCATCTCCAGAGGATTATTACATTGAGGGACAAGGATCATTGCTCCAgtaagtgttt ... tatctgtcagATGTGTTCTGACGCCAGGAGATCCATACATGCCCTTACCAAATGACGAAAT
EST: CTTTCATCTCCAGAGGATTATTACATTGAGGGACAAGGATCATTGCTCCA ATGTGTTCTGACGCCAGGAGATCCATACATGCCCTTACCAAATGACGAAATEST: gi|209717714|gb|BW671532.1|BW671532
genomic: CTTTCATCTCCAGAGGATTATTACATTGAGGGACAAGGATCATTGCTCCAgtaagtgttt ... tatctgtcagATGTGTTCTGACGCCAGGAGATCCATACATGCCCTTACCAAATGACGAAAT
EST: ACATTGAGGGACAAGGATCATTGCTCCA ATGTGTTCTGACGCCAGGAGATCCATACATGCCCTTACCAAATGACGAAAT
genomic: ACATTGAGGGACAAGGATCATTGCTCCAgtaagtgttt ... tatctgtcagATGTGTTCTGACGCCAGGAGATCCATACATGCCCTTACCAAATGACGAAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCTTCTCTATACACCCGATGCAGATTTTTCTTGCTTTGCAGACCTTGCACTTTCATCTCCAGAGGATTATTACATTGAGGGACAAGGATCATTGCTCCAgtaagtgtttgtaatcttgcacttctaaattttcacttccattcatgagttgtttacctgaaaatattttaaggaaagatttaattaagtgacttgcttg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT