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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CATTCCTGGACTTGGCAGAAAGGTTCCATCTACTGCAGTTGCTGGAGGGATGGTTACTGTTGGATCACGGGATAGTGCTCAGTCACAACTCTGGCTACAGgttattttttactatatactgatgatatgagggatcaagttactccaagagtaacatcctcacttttcattttcttgaaatcaaatggttaagattagct...

Basic information

species Glycine max
transcript GLYMA09G34170.1
intron # 11
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|31473646|gb|CD415674.1|CD415674
EST:     TGGTTACTGTTGGATCACGGGATAGTGCTCAGTCACAACTCTGGCTACAG                         GATGAAAGAGAGCTTAAAAGGCCAAGGCGGAAACAGTCTAACAGGGAATCT
genomic: TGGTTACTGTTGGATCACGGGATAGTGCTCAGTCACAACTCTGGCTACAGgttatttttt ... taactttcagGATGAAAGAGAGCTTAAAAGGCAAAGGCGGAAGCAGTCTAACAGGGAATCT
EST: gi|20498852|gb|BQ273782.1|BQ273782
EST:     TGGTTACTGTTGGATCACGGGATAGTGCTCAGTCACAACTCTGGCTACAG                         GATGAAAGAGAGCTTAAAAGGCAAAGGCGGAAGCAGTCTAACAGGGAATCT
genomic: TGGTTACTGTTGGATCACGGGATAGTGCTCAGTCACAACTCTGGCTACAGgttatttttt ... taactttcagGATGAAAGAGAGCTTAAAAGGCAAAGGCGGAAGCAGTCTAACAGGGAATCT
EST: gi|254313915|gb|GR831544.1|GR831544
EST:     TGGTTACTGTTGGATCACGGGATAGTGCTCAGTCACAACTCTGGCTACAG                         GATGAAAGAGAGCTTAAAAGGCAAAGGCGGAAGCAGTCTAACAGGGAATCT
genomic: TGGTTACTGTTGGATCACGGGATAGTGCTCAGTCACAACTCTGGCTACAGgttatttttt ... taactttcagGATGAAAGAGAGCTTAAAAGGCAAAGGCGGAAGCAGTCTAACAGGGAATCT