1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
ACAACAGAGGCTGGCTTTGTATCAAGGAGTCTGTCCAATATACATGGAATTCTGTGACGATTCTGAGGCAACTTTCAGAAGAGCCTTGAATTTGCTGCAGgtaatctttggaggatgtgtacactgatttacagtgttgtgtttattttctgtgattcatactttcaatgcatattcaatgccaagcctttcttccggtg...
species | Glycine max |
transcript | GLYMA09G23150.1 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: TCTGTGACGATTCTGAGGCAACTTTCAGAAGAGCCTTGAATTTGCTGCAG AAGCAAGGAATGGTGAAGGAAGGAGAAGAAGTAGCACTTGTACAAAGTGGTEST: gi|208131341|gb|GD931536.1|GD931536
genomic: TCTGTGACGATTCTGAGGCAACTTTCAGAAGAGCCTTGAATTTGCTGCAGgtaatctttg ... tcgtgcacagAAGCAAGGAATGGTGAAGGAAGGAGAAGAAGTAGCACTTGTACAAAGTGGT
EST: TCTGTGACGATTCTGAGGCAACTTTCAGAAGAGCCTTGAATTTGCTGCAG AAGCAAGGAATGGTGAAGGAAGGAGAAGAAGTAGCACTEST: gi|193487302|gb|FK450939.1|FK450939
genomic: TCTGTGACGATTCTGAGGCAACTTTCAGAAGAGCCTTGAATTTGCTGCAGgtaatctttg ... tcgtgcacagAAGCAAGGAATGGTGAAGGAAGGAGAAGAAGTAGCACT
EST: TCTGTGACGATTCTGAGGCAACTTTCAGAAGAGCCTTGAATTTGCTGCAG AAGCAAGGAATGGTGAAGGAAGGAGAAGAAAGTAGCACTTGTACAAAGTGGEST: gi|193527829|gb|FK488035.1|FK488035
genomic: TCTGTGACGATTCTGAGGCAACTTTCAGAAGAGCCTTGAATTTGCTGCAGgtaatctttg ... tcgtgcacagAAGCAAGGAATGGTGAAGGAAGGAGAAGAA-GTAGCACTTGTACAAAGTGG
EST: CTGTGACGATTCTGAGGCAACTTTCAGAAGAGCCTTGAATTTGCTGACAG AAGCAAGGAATGGTGAAGGAAGGAGA
genomic: CTGTGACGATTCTGAGGCAACTTTCAGAAGAGCCTTGAATTTGCTG-CAGgtaatctttg ... tcgtgcacagAAGCAAGGAATGGTGAAGGAAGGAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACAACAGAGGCTGGCTTTGTATCAAGGAGTCTGTCCAATATACATGGAATTCTGTGACGATTCTGAGGCAACTTTCAGAAGAGCCTTGAATTTGCTGCAGgtaatctttggaggatgtgtacactgatttacagtgttgtgtttattttctgtgattcatactttcaatgcatattcaatgccaagcctttcttccggtg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG