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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTTGGGATATACGAAGTAAAATGCAGATTCATGCTCTTTCAGGTCATGATAACACTGTCTGTTCTGTGTTTACGCGGCCAACGgtatgcagactcttctgttgtctatatcatttttttcttgatattcagttgtgccacaatattgcatagtctatatacatgcatttgtcctccgacatac...

Basic information

species Glycine max
transcript GLYMA09G04910.1
intron # 11
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193326912|gb|FK287795.1|FK287795
EST:     CTCTTTCAGGTCATGATAACACTGTCTGTTCTGTGTTTACGCGGCCAACG                         GATCCCCAAGTTGTTACAGGTTCTCAAATGACACTACCATCAAGATGTGGG
genomic: CTCTTTCAGGTCATGATAACACTGTCTGTTCTGTGTTTACGCGGCCAACGgtatgcagac ... ttgtttacagGATCCCCAAGTTGTTACAGGTTCTCA--TGACACTACCATCAAGATGTGGG
EST: gi|21888738|gb|BQ741951.1|BQ741951
EST:     CTCTTTCAGGTCATGATAACACTGTCTGTTCTGTGTTTACGCGGCCAACG                         GATCCCCAAGTTGTTACAGGTTCTCATGACACTACCATCAAGATGTGGGAC
genomic: CTCTTTCAGGTCATGATAACACTGTCTGTTCTGTGTTTACGCGGCCAACGgtatgcagac ... ttgtttacagGATCCCCAAGTTGTTACAGGTTCTCATGACACTACCATCAAGATGTGGGAC
EST: gi|10236381|gb|BE805269.1|BE805269
EST:     GATAACACTGTCTGTTCTGTGTTTACGCGGCCAACG                         GATCCCCAAGTTGTTACAGGTTCTCATGACACTACCATCAAGATGTGGGAC
genomic: GATAACACTGTCTGTTCTGTGTTTACGCGGCCAACGgtatgcagac ... ttgtttacagGATCCCCAAGTTGTTACAGGTTCTCATGACACTACCATCAAGATGTGGGAC
EST: gi|193460952|gb|FK426699.1|FK426699
EST:     TAACACTGTCTGTTCTGTGTTTACGCGGCCAACG                         GATCCCCAAGTTGTTACAGGTTCTCATGACACTACCATCAAGATGTGGGAC
genomic: TAACACTGTCTGTTCTGTGTTTACGCGGCCAACGgtatgcagac ... ttgtttacagGATCCCCAAGTTGTTACAGGTTCTCATGACACTACCATCAAGATGTGGGAC
EST: gi|254313963|gb|GR831592.1|GR831592
EST:     CTCTTTCAGGACATGATAACACTGTCTGCTCTGTGTTTACGCGGCCGACG                         GATCCCCAAGTTGTTACGGGTTCTCATGACACTACCATCAAGATGTGGGAC
genomic: CTCTTTCAGGTCATGATAACACTGTCTGTTCTGTGTTTACGCGGCCAACGgtatgcagac ... ttgtttacagGATCCCCAAGTTGTTACAGGTTCTCATGACACTACCATCAAGATGTGGGAC
EST: gi|208324693|gb|GE125770.1|GE125770
EST:     AACACTGTCTGTTTTCTTGTTGTTTACGCGGCCAACG                         GATCCCCAAGTTGTTACAGGTTCTCATGACACTACCATCAAGATGTGGGAC
genomic: AACACTGTCTG--TTC-TG-TGTTTACGCGGCCAACGgtatgcagac ... ttgtttacagGATCCCCAAGTTGTTACAGGTTCTCATGACACTACCATCAAGATGTGGGAC