1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
GCTCACATAAAACCTGCTGGGCATGAAGATTCGGGTGTGGTGTCACGGACTAATCTAAAGCACTTgtaaggaatttctcttcaactaatattgatagctcagtttatttaattagttctctctctctctctctctctctctctcagtttatttaatattagcttg...
species | Glycine max |
transcript | GLYMA09G01270.1 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: GCTGGGCATGAAGATTCGGGTGTGGTGTCACGGACTAATCTAAAGCACTT ATATTGGACATTGACCCAACAACTTGCTCACCATACAATCAACGGTTGCAAEST: gi|15202674|gb|BI425525.1|BI425525
genomic: GCTGGGCATGAAGATTCGGGTGTGGTGTCACGGACTAATCTAAAGCACTTgtaaggaatt ... ctctctgtagATATTGGACATTGACCCAACAACTTGCTCACCATACAATCAACGGTTGCAA
EST: GCTGGGCATGAAGATTCGGGTGTGGTGTCACGGACTAATCTAAAGCACTT ATATTGGACATTGACCCAACAACTTGCTCACCATACAATCAACGGTTGCAAEST: gi|14011019|gb|BG725941.1|BG725941
genomic: GCTGGGCATGAAGATTCGGGTGTGGTGTCACGGACTAATCTAAAGCACTTgtaaggaatt ... ctctctgtagATATTGGACATTGACCCAACAACTTGCTCACCATACAATCAACGGTTGCAA
EST: GCTGGGCATGAAGATTCGGGTGTGGTGTCACGGACTAATCTAAAGCACTT ATATTGGACATTGACCCAACAACTTGCTCACCATACAATCAACGGTTGCAAEST: gi|7232656|gb|AW568010.1|AW568010
genomic: GCTGGGCATGAAGATTCGGGTGTGGTGTCACGGACTAATCTAAAGCACTTgtaaggaatt ... ctctctgtagATATTGGACATTGACCCAACAACTTGCTCACCATACAATCAACGGTTGCAA
EST: GCTGGGCATGAAGATTCGGGTGTGGTGTCACGGACTAATCTAAAGCACTT ATATTGGACATTGACCCAACAACTTGCTCACCATACAATCAACGGTTGCAAEST: gi|7232634|gb|AW567988.1|AW567988
genomic: GCTGGGCATGAAGATTCGGGTGTGGTGTCACGGACTAATCTAAAGCACTTgtaaggaatt ... ctctctgtagATATTGGACATTGACCCAACAACTTGCTCACCATACAATCAACGGTTGCAA
EST: GCTGGGCATGAAGATTCGGGTGTGGTGTCACGGACTAATCTAAAGCACTT ATATTGGACATTGACCCAACAACTTGCTCACCATACAATCAACGGTTGCAAEST: gi|298184616|gb|HO029829.1|HO029829
genomic: GCTGGGCATGAAGATTCGGGTGTGGTGTCACGGACTAATCTAAAGCACTTgtaaggaatt ... ctctctgtagATATTGGACATTGACCCAACAACTTGCTCACCATACAATCAACGGTTGCAA
EST: GCTGGGCATGAAGATTCGGGTGTGGTGTCACGGACTAATCTAAAGCACTT ATATTGGACATTGACCCAACAACTTGCTCACCATACAATCAACGGTTGCAAEST: gi|10847964|gb|BF071656.1|BF071656
genomic: GCTGGGCATGAAGATTCGGGTGTGGTGTCACGGACTAATCTAAAGCACTTgtaaggaatt ... ctctctgtagATATTGGACATTGACCCAACAACTTGCTCACCATACAATCAACGGTTGCAA
EST: GCTGGGCATGAAGATTCGGGTGTGGTGTCACGGACTAATCTAAAGCACTT ATATTGGACATTGACCCAACAACTTGCTCACCATACAATCAACGGTTGCAA
genomic: GCTGGGCATGAAGATTCGGGTGTGGTGTCACGGACTAATCTAAAGCACTTgtaaggaatt ... ctctctgtagATATTGGACATTGACCCAACAACTTGCTCACCATACAATCAACGGTTGCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCTCACATAAAACCTGCTGGGCATGAAGATTCGGGTGTGGTGTCACGGACTAATCTAAAGCACTTgtaaggaatttctcttcaactaatattgatagctcagtttatttaattagttctctctctctctctctctctctctctcagtttatttaatattagcttg
- - - - - - - - - - - TGAAGA