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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTTGTTATGGCATTGTCGAATCCATTAAAAGGTGAGCGCAAACCTGGAACTGTTGGCAAACCATTTCCCGGTATACAGgttagttgagcttgcacttgttcactgctgcttgcaatagaatatgggctgtttattatcactcattcattcaactgttgcataggctgtttacatgatc...

Basic information

species Glycine max
transcript GLYMA08G21840.1
intron # 11
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|5760765|gb|AI966128.1|AI966128
EST:     AAGGTGAGCGCAAACCTGGAACTGTTGGCAAACCATTTCCCGGTATACAG                         GTCAAGATTATTACAGATGAAGAGAGTG
genomic: AAGGTGAGCGCAAACCTGGAACTGTTGGCAAACCATTTCCCGGTATACAGgttagttgag ... tgcttgacagGTCAAGATTATTACAGATGAAGAGAGTG
EST: gi|192333243|gb|FK026124.1|FK026124
EST:     AAGGTGAGTGCAAACCTGGAACTGTTGGCAAACCATTTCCCGGTATACAG                         GTCAAGATTATTACAGATGAAGAGAGTGTGAATGAAAATACTGGAATGGGT
genomic: AAGGTGAGCGCAAACCTGGAACTGTTGGCAAACCATTTCCCGGTATACAGgttagttgag ... tgcttgacagGTCAAGATTATTACAGATGAAGAGAGTGTGAATGAAAATACTGGAATGGGT