1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
CTTTCAGGAAGCTGAAGAGGACTGCAATATGGCCATATTACATGATAAGAAGgtgagaagatgggcatgtcagcatgtgactgacaagatcatggaaaacttgtattctaaacctgccatgtataataataattaatgaactttaataacta...
species | Glycine max |
transcript | GLYMA08G19070.1 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: GGAAGCTGAAGAGGACTGCAATATGGCCATCCAACATGATAAGAAG AATGTGAAGGCAGAAATGAGACGTGGAACTGCTAGAGAAGTACTACTTTGTEST: gi|23732795|gb|BU764570.1|BU764570
genomic: GGAAGCTGAAGAGGACTGCAATATGGCCATATTACATGATAAGAAGgtgagaagat ... tttactgcagAATGTGAAGGCATATCTGAGACGTGGAACTGCTAGAGAAGTACTACTTTGT
EST: TTCAGGAAGCTGAAGAGGACTGCAATATGGCCATATTACATGATAAGAAG AATGTGAAGGCATATCTGAGACGTGGAACTGCTAGAGAAGTACTACTTTGTEST: gi|209708228|gb|BW678598.1|BW678598
genomic: TTCAGGAAGCTGAAGAGGACTGCAATATGGCCATATTACATGATAAGAAGgtgagaagat ... tttactgcagAATGTGAAGGCATATCTGAGACGTGGAACTGCTAGAGAAGTACTACTTTGT
EST: CATGATAAGAAG AATGTGAAGGCATATCTGAGACGTGGAACTGCTAGAGAAGTACTACTTTGT
genomic: CATGATAAGAAGgtgagaagat ... tttactgcagAATGTGAAGGCATATCTGAGACGTGGAACTGCTAGAGAAGTACTACTTTGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTTTCAGGAAGCTGAAGAGGACTGCAATATGGCCATATTACATGATAAGAAGgtgagaagatgggcatgtcagcatgtgactgacaagatcatggaaaacttgtattctaaacctgccatgtataataataattaatgaactttaataacta
- - - - AAGCTG
- - - - AGCTGA
- - - - - CTGAAG
- - - - - - TGAAGA
- - - - - - - AAGAGG
- - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - AAGAAG