1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GATTTTTTGTGGTGCAGTGATCCTTCTTTTAACCACAAATATGAGTTATGTCATGTACATAGTATCGGTATTCATTGGCATAGCAAATGCTCTCATGATGgtatgatgtaatctttacttcattaaattgacaaaagtaaaagaaatatacttctcttgttttccacattttgaagctcatttctctttgatgacatatt...
species | Glycine max |
transcript | GLYMA08G16870.1 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: TCATGTACATAGTATCGGTATTCATTGGCATAGCAAATGCTCTCATGATG GTAACTGGAGTAAGCATGCAGAATTTTCTCATTGGAGAGAACCTTAATGGTEST: gi|6200824|gb|AW152924.1|AW152924
genomic: TCATGTACATAGTATCGGTATTCATTGGCATAGCAAATGCTCTCATGATGgtatgatgta ... tttataatagGTAACTGGAGTAAGCATGCAGAATTTTCTCATTGGAGAGAACCTTAATGGT
EST: TCATGTACATAGTATCGGTATTCATTGGCATAGCAAATGCTCTCATGATG GTAACTGGAGTAAGCATGCAGAATTTTCTCATTGGAGAGAACCTTAATGGTEST: gi|27427316|gb|CA938836.1|CA938836
genomic: TCATGTACATAGTATCGGTATTCATTGGCATAGCAAATGCTCTCATGATGgtatgatgta ... tttataatagGTAACTGGAGTAAGCATGCAGAATTTTCTCATTGGAGAGAACCTTAATGGT
EST: TCATGTACATAGTATCGGTATTCATTGGCATAGCAAATGCTCTCATGATG GTAACTGGAGTAAGCATGCAGAATTTTCTCATTGGAGAGAACCTTAATGGTEST: gi|18038731|gb|BM307025.1|BM307025
genomic: TCATGTACATAGTATCGGTATTCATTGGCATAGCAAATGCTCTCATGATGgtatgatgta ... tttataatagGTAACTGGAGTAAGCATGCAGAATTTTCTCATTGGAGAGAACCTTAATGGT
EST: TCATGTACATAGTATCGGTATTCATTGGCATAGCAAATGCTCTCATGATG GTAACTGGAGTAAGCATGCAGAATTTTCTCATTGGAGAGAACCTTAATGGT
genomic: TCATGTACATAGTATCGGTATTCATTGGCATAGCAAATGCTCTCATGATGgtatgatgta ... tttataatagGTAACTGGAGTAAGCATGCAGAATTTTCTCATTGGAGAGAACCTTAATGGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATTTTTTGTGGTGCAGTGATCCTTCTTTTAACCACAAATATGAGTTATGTCATGTACATAGTATCGGTATTCATTGGCATAGCAAATGCTCTCATGATGgtatgatgtaatctttacttcattaaattgacaaaagtaaaagaaatatacttctcttgttttccacattttgaagctcatttctctttgatgacatatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaagaaa