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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CACCTCCTGCTCACGTGCTGAGCCGTGGTATCGGTTGGCAGGGAATTGGAATCTTGCTGAATGGCCTTTTCGGAACACTCACTGGTTCTACTGTTTCTGTgtgagtgttattattcttcatgaagtgaactcatgcttttcttcacttttatggggcacatattgactcttttatgactaagacag

Basic information

species Glycine max
transcript GLYMA08G12360.1
intron # 11
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|58017520|gb|CX704262.1|CX704262
EST:     ATCTTGCTGAATGCCCTTTTCGGAACACTCACTGGTTCTACTGTTTCTGT                         AGAGAATGTGGGGCTTCTAGGAAGCAATCGTATTGGTAGTAGAAGGGTCAT
genomic: ATCTTGCTGAATGGCCTTTTCGGAACACTCACTGGTTCTACTGTTTCTGTgtgagtgtta ... actaagacagAGAGAATGTGGGGCTTCTAGGAAGCAATCGTATTGGTAGTAGAAGGGTCAT
EST: gi|22525738|gb|BU084549.1|BU084549
EST:     ATCTTGCTGAATGGCCTTTTCGGAACACTCACTGGTTCTACTGTTTCTGT                         AGAGAATGTGGGGCTTCTAGGAAGCAATCGTATTGGTAGTAGAAGGGTCAT
genomic: ATCTTGCTGAATGGCCTTTTCGGAACACTCACTGGTTCTACTGTTTCTGTgtgagtgtta ... actaagacagAGAGAATGTGGGGCTTCTAGGAAGCAATCGTATTGGTAGTAGAAGGGTCAT
EST: gi|58014211|gb|CX700953.1|CX700953
EST:     ATCTTGCTGAATGGCCTTTTCGGAACACTCACTGGTTCTACTGTTTCTGT                         AGAGAATGTGGGGCTTCTAGGAAGCAATCGTATTGGTAGTAGAAGGGTCAT
genomic: ATCTTGCTGAATGGCCTTTTCGGAACACTCACTGGTTCTACTGTTTCTGTgtgagtgtta ... actaagacagAGAGAATGTGGGGCTTCTAGGAAGCAATCGTATTGGTAGTAGAAGGGTCAT
EST: gi|58024713|gb|CX711454.1|CX711454
EST:     ATCTTGCTGAATGGCCTTTTCGGAACACTCACTGGTTCTACTGTTTCTGT                         AGAGAATGTGGGGCTTCTAGGAAGCAATCGTATTGGTAGTAGAAGGGTCAT
genomic: ATCTTGCTGAATGGCCTTTTCGGAACACTCACTGGTTCTACTGTTTCTGTgtgagtgtta ... actaagacagAGAGAATGTGGGGCTTCTAGGAAGCAATCGTATTGGTAGTAGAAGGGTCAT
EST: gi|22525586|gb|BU084397.1|BU084397
EST:     ATCTTGCTGAATGGCCTTTTCGGAACACTCACTGGTTCTACTGTTTCTGT                         AGAGAATGTGGGGCTTCTAGGAAGCAATCGTATTGGTAGTAGAAGGGTCAT
genomic: ATCTTGCTGAATGGCCTTTTCGGAACACTCACTGGTTCTACTGTTTCTGTgtgagtgtta ... actaagacagAGAGAATGTGGGGCTTCTAGGAAGCAATCGTATTGGTAGTAGAAGGGTCAT
EST: gi|58018670|gb|CX705412.1|CX705412
EST:     ATCTTGCTGAATGGCCTTTTCGGAACACTCACTGGTTCTACTGTTTCTGT                         AGAGAATGTGGGGCTTCTAGGAAGCAATCGTATTGGTAGTAGAAGGGTCAT
genomic: ATCTTGCTGAATGGCCTTTTCGGAACACTCACTGGTTCTACTGTTTCTGTgtgagtgtta ... actaagacagAGAGAATGTGGGGCTTCTAGGAAGCAATCGTATTGGTAGTAGAAGGGTCAT