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AGGTGGTCCTCTTACTGTAGTTGAATACAGTGAGTTGGACCAGTCACTAGCTTCTGCAGTCAATCAAGCAACTGGCCGTCTTCGTTTTTGTTGGAGTAATgttagtctattcttcctatatataatctcattgcttctcctttatgcactcaatttgccataagctttgaggatcatttccctttaaatttgggtatgat...
species | Glycine max |
transcript | GLYMA08G09170.1 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: TTTGTTGGAGTAAT GTCTGCTTACACATGTTCACTCTGGATTTTCTGAACCAAGTGGCAAATGGCEST: gi|254342038|gb|GR853175.1|GR853175
genomic: TTTGTTGGAGTAATgttagtctat ... gtgatttcagGTCTGCTTACACATGTTCACTCTGGATTTTCTGAACCAAGTGGCAAATGGC
EST: CTTCTGCAGTCAATCAAGCAACTGGCCGTCTTCGTTTTTGTTGGAGTAAT GTCTGCTTACACATGTTCACTCTGGATTTTCTGAACCAAGTGGCAAATGGCEST: gi|4313957|gb|AI461076.1|AI461076
genomic: CTTCTGCAGTCAATCAAGCAACTGGCCGTCTTCGTTTTTGTTGGAGTAATgttagtctat ... gtgatttcagGTCTGCTTACACATGTTCACTCTGGATTTTCTGAACCAAGTGGCAAATGGC
EST: CTTCTGCAGTCAATCAAGCAACTGGCCGTCTTCGTTTTTGTTGGAGTAAT GTCTGCTTACACATGTTCACTCTGGATTTTCTGAATCAAGTGGCAAATGGCEST: gi|208215335|gb|GE011090.1|GE011090
genomic: CTTCTGCAGTCAATCAAGCAACTGGCCGTCTTCGTTTTTGTTGGAGTAATgttagtctat ... gtgatttcagGTCTGCTTACACATGTTCACTCTGGATTTTCTGAACCAAGTGGCAAATGGC
EST: CTTCTGCAGTCAATCAAGCAACTGGCCGTCTTCGTTTTTGTTGGAGTAAT GTCTGCTTACACATGTTCACTCTGGATTTTCTGAACCAAGTGGCAAATGGCEST: gi|298176684|gb|HO026805.1|HO026805
genomic: CTTCTGCAGTCAATCAAGCAACTGGCCGTCTTCGTTTTTGTTGGAGTAATgttagtctat ... gtgatttcagGTCTGCTTACACATGTTCACTCTGGATTTTCTGAACCAAGTGGCAAATGGC
EST: CTTCTGCAGTCAATCAAGCAACTGGCCGTCTTCGTTTTTGTTGGAGTAAT GTCTGCTTACACATGTTCACTCTGGATTTTCTGAACCAAGTGGCAAATGGCEST: gi|151397105|gb|EV266978.1|EV266978
genomic: CTTCTGCAGTCAATCAAGCAACTGGCCGTCTTCGTTTTTGTTGGAGTAATgttagtctat ... gtgatttcagGTCTGCTTACACATGTTCACTCTGGATTTTCTGAACCAAGTGGCAAATGGC
EST: CTTCTGCAGTCAATCAAGCAACTGGCCGTCTTCGTTTTTGTTGGAGTAAT GTCTGCTTACACATGTTCACTCTGGATTTTCTGAATCAAGTGGCAAATGGCEST: gi|254329705|gb|GR839258.1|GR839258
genomic: CTTCTGCAGTCAATCAAGCAACTGGCCGTCTTCGTTTTTGTTGGAGTAATgttagtctat ... gtgatttcagGTCTGCTTACACATGTTCACTCTGGATTTTCTGAACCAAGTGGCAAATGGC
EST: CTTCTGCAGTCAATCAAGCAACTGGCCGTCTTCGTTTTTGTTGGAGTAAT GTCTGCTTACACATGTTCACTCTGGATTTTCTGAATCAAGTGGCAA-TGGC
genomic: CTTCTGCAGTCAATCAAGCAACTGGCCGTCTTCGTTTTTGTTGGAGTAATgttagtctat ... gtgatttcagGTCTGCTTACACATGTTCACTCTGGATTTTCTGAACCAAGTGGCAAATGGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGGTGGTCCTCTTACTGTAGTTGAATACAGTGAGTTGGACCAGTCACTAGCTTCTGCAGTCAATCAAGCAACTGGCCGTCTTCGTTTTTGTTGGAGTAATgttagtctattcttcctatatataatctcattgcttctcctttatgcactcaatttgccataagctttgaggatcatttccctttaaatttgggtatgat
- - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG