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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTACCCAATATCAAATTCAATGTAGCTAAAGTGTTGCAGTCTCTCATCCCAATTGTTGATCAGTCTgtaagtagcttccatttaaggtttcatctttagtgcacttccctagttacttggattataataatatggatttctaaactatgaaacttctttcttgaaa...

Basic information

species Glycine max
transcript GLYMA07G10000.1
intron # 11
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|207814742|gb|GD788987.1|GD788987
EST:     TCAATGTAGCTAAAGTGTTGCAGTCTCTCATCCCAATTGTTGATCAGTCT                         GTTGTTGAGAGTACCATCCGTCCCTGTCTGGTTGAGCTCAGTGAGG
genomic: TCAATGTAGCTAAAGTGTTGCAGTCTCTCATCCCAATTGTTGATCAGTCTgtaagtagct ... aataatgaagGTTGTTGAGAGTACCATCCGTCCCTGTCTGGTTGAGCTCAGTGAGG
EST: gi|193512327|gb|FK468209.1|FK468209
EST:     TCAATGTAGCTAAAGTGTTGCAGTCTCTCATCCCAATTGTTGATCAGTCT                         GTTGTTGAGAGTACCATTCGTCCCTGTTTGGTTGAGCTCAGTGAGGATCCA
genomic: TCAATGTAGCTAAAGTGTTGCAGTCTCTCATCCCAATTGTTGATCAGTCTgtaagtagct ... aataatgaagGTTGTTGAGAGTACCATCCGTCCCTGTCTGGTTGAGCTCAGTGAGGATCCA
EST: gi|21600503|gb|BQ610834.1|BQ610834
EST:     TCAATGTAGCTAAAGTGTTGCAGTCTCTCATCCCAATTGTTGATCAGTCT                         GTTGTTGAGAGTACCATCCGTCCCTGTCTGGTTGAGCTCAGTGAGGATCCA
genomic: TCAATGTAGCTAAAGTGTTGCAGTCTCTCATCCCAATTGTTGATCAGTCTgtaagtagct ... aataatgaagGTTGTTGAGAGTACCATCCGTCCCTGTCTGGTTGAGCTCAGTGAGGATCCA
EST: gi|57575814|gb|CX548785.1|CX548785
EST:     TCAATGTAGCTAAAGTGTTGCAGTCTCTCATCCCAATTGTTGATCAGTCT                         GTTGTTGAGAGTACCATCCGTCCCTGTCTGGTTGAGCTCAGTGAGGATCCA
genomic: TCAATGTAGCTAAAGTGTTGCAGTCTCTCATCCCAATTGTTGATCAGTCTgtaagtagct ... aataatgaagGTTGTTGAGAGTACCATCCGTCCCTGTCTGGTTGAGCTCAGTGAGGATCCA