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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTTGTTATGGCATTGTCGAATCCATTGAAAGGTGAGCGCAAGCCTGGAACCGTTGGCAAACCATTTCCTGGTATACAGgttagttgagcttgcacttgttcactgctgcttgccatagaatatgggctgtttattatcactcattcattccactgttgcatagtctgtttacatgatc...

Basic information

species Glycine max
transcript GLYMA07G02180.1
intron # 11
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|19937440|gb|BQ081291.1|BQ081291
EST:     AAGGTGAGCGCAAGCCTGGAACCGTTGGCAAACCATTTCCTGGTATACAG                         GTCAAGATTATTGCAGATGAAGAGAGTGTGAATGGAAATACTGGAATGGGT
genomic: AAGGTGAGCGCAAGCCTGGAACCGTTGGCAAACCATTTCCTGGTATACAGgttagttgag ... tgcttgacagGTCAAGATTATTGCAGATGAAGAGAGTGTGAATGGAAATACTGGAATGGGT
EST: gi|254347505|gb|GR853754.1|GR853754
EST:     AAGGTGAGCGCAAGCCTGGAACCGTTGGCAAACCATTTCCTGGTATACAG                         GTCAAGATTATTGCAGATGAAGAGAGTGTGAATGGAAATACTGGAATGGGT
genomic: AAGGTGAGCGCAAGCCTGGAACCGTTGGCAAACCATTTCCTGGTATACAGgttagttgag ... tgcttgacagGTCAAGATTATTGCAGATGAAGAGAGTGTGAATGGAAATACTGGAATGGGT
EST: gi|162286164|gb|FC456612.1|FC456612
EST:     AAGGTGAGCGCAAGCCTGGAACCGTTGGCAAACCATTTCCTGGTATACAG                         GTCAAGATTATTGCAGATGAAGAGAGTGTGAATGGAAATACTGGAATGGGT
genomic: AAGGTGAGCGCAAGCCTGGAACCGTTGGCAAACCATTTCCTGGTATACAGgttagttgag ... tgcttgacagGTCAAGATTATTGCAGATGAAGAGAGTGTGAATGGAAATACTGGAATGGGT
EST: gi|17153356|gb|BM143289.1|BM143289
EST:     AAGGTGAGCGCAAGCCTGGAACCGTTGGCAAACCATTTCCTGGTATACAG                         GTCAAGATTATTGCAGATGAA
genomic: AAGGTGAGCGCAAGCCTGGAACCGTTGGCAAACCATTTCCTGGTATACAGgttagttgag ... tgcttgacagGTCAAGATTATTGCAGATGAA
EST: gi|151393469|gb|EV263344.1|EV263344
EST:     AAGGTGAGCGCAAGCCTGGAACCGTTGGCAAACCATTTCCTGGTATACAG                         GTCAAGATTATTGCAGATGAAGAGAGTGTGAATGGAAATACTGGAATGGGT
genomic: AAGGTGAGCGCAAGCCTGGAACCGTTGGCAAACCATTTCCTGGTATACAGgttagttgag ... tgcttgacagGTCAAGATTATTGCAGATGAAGAGAGTGTGAATGGAAATACTGGAATGGGT
EST: gi|254321454|gb|GR824771.1|GR824771
EST:     AAGGTGAGCGCAAGCCTGGAACCGTTGGCAAACCATTTCCTGGTATACAG                         GTCAAGATTATTGCAGATGAAGAGAGTGTGAATGGAAATACTGGAATGGGT
genomic: AAGGTGAGCGCAAGCCTGGAACCGTTGGCAAACCATTTCCTGGTATACAGgttagttgag ... tgcttgacagGTCAAGATTATTGCAGATGAAGAGAGTGTGAATGGAAATACTGGAATGGGT
EST: gi|9205100|gb|BE331324.1|BE331324
EST:     AAGGTGAGCGCAAGCCTGGAACCGGTGGCAAACCATTTCCTGGTATACAG                         GTCAAGATTATTGCAGATGAAGAGAGTGTGAATGGAAATACTGGAATGGGT
genomic: AAGGTGAGCGCAAGCCTGGAACCGTTGGCAAACCATTTCCTGGTATACAGgttagttgag ... tgcttgacagGTCAAGATTATTGCAGATGAAGAGAGTGTGAATGGAAATACTGGAATGGGT