1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
CAGTTGCTGTTACTTGTGTACAGTCTATCAGTTCATCAGGCCCGGGGGAGAATTCGGGTGATCACATTGGAAACGATGGTGGTCTTGAAACATGTAACATgtaattttcttcaaactaattacattatcatttgctaactgtttccattttccattatttatttgggtttttattaacaaggccgagttatttgatcaac...
species | Glycine max |
transcript | GLYMA06G08660.1 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: AATTCGGGTGATCACATTGGAAACGATGGTGGTCTTGAAACATGTAACAT ATTTGGTGGAACACCTTTTAGGAAAAGCATTGAATCACCTTCAGCATGGAAEST: gi|193493167|gb|FK460029.1|FK460029
genomic: AATTCGGGTGATCACATTGGAAACGATGGTGGTCTTGAAACATGTAACATgtaattttct ... ttgatttcagATTTGGTGGAACACCTTTTAGGAAAAGCATTGAATCACCTTCAGCATGGAA
EST: AATTCGGGTGATCACATTGGAAACGATGGTGGTCTTGAAACATGTAACAT ATTTGGTGGAACACCTTTTAGGAAAAGCATTGAATCACCTTCAGCATGGAAEST: gi|193440550|gb|FK409511.1|FK409511
genomic: AATTCGGGTGATCACATTGGAAACGATGGTGGTCTTGAAACATGTAACATgtaattttct ... ttgatttcagATTTGGTGGAACACCTTTTAGGAAAAGCATTGAATCACCTTCAGCATGGAA
EST: AATTCGGGTGATCACATTGGAAACGATGGTGGTCTTGAAACATGTAACAT ATTTGGTGGAACACCTTTTAGGAAAAGCATTGAATCACCTTCAGCATGGAAEST: gi|193326388|gb|FK291499.1|FK291499
genomic: AATTCGGGTGATCACATTGGAAACGATGGTGGTCTTGAAACATGTAACATgtaattttct ... ttgatttcagATTTGGTGGAACACCTTTTAGGAAAAGCATTGAATCACCTTCAGCATGGAA
EST: AATTCGGGTGATCACATTGGAAACGATGGTGGTCTTGAAACATGTAACAT ATTTGGTGGAACACCTTTTAGGAAAAGCATTGAATCACCTTCAGCATGGAAEST: gi|208076846|gb|GD877385.1|GD877385
genomic: AATTCGGGTGATCACATTGGAAACGATGGTGGTCTTGAAACATGTAACATgtaattttct ... ttgatttcagATTTGGTGGAACACCTTTTAGGAAAAGCATTGAATCACCTTCAGCATGGAA
EST: AATTCGGGTGATCACATTGGAAACGATGGTGGTCTTGAAACATGTAACAT ATTTGGTGGAACACCTTTTAGGAAAAGCATTGAATCACCTTCAGCATGGAAEST: gi|193712978|gb|FK649245.1|FK649245
genomic: AATTCGGGTGATCACATTGGAAACGATGGTGGTCTTGAAACATGTAACATgtaattttct ... ttgatttcagATTTGGTGGAACACCTTTTAGGAAAAGCATTGAATCACCTTCAGCATGGAA
EST: ATTCGGGTTGATCACATTGGAAACGATGGTGGTCTTGAAACATGTAACAT ATTTGGTGGAACACCTTTTAGGAAAAGCATTGAATCACCTTCAGCATGGAA
genomic: ATTCGGG-TGATCACATTGGAAACGATGGTGGTCTTGAAACATGTAACATgtaattttct ... ttgatttcagATTTGGTGGAACACCTTTTAGGAAAAGCATTGAATCACCTTCAGCATGGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAGTTGCTGTTACTTGTGTACAGTCTATCAGTTCATCAGGCCCGGGGGAGAATTCGGGTGATCACATTGGAAACGATGGTGGTCTTGAAACATGTAACATgtaattttcttcaaactaattacattatcatttgctaactgtttccattttccattatttatttgggtttttattaacaaggccgagttatttgatcaac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG