1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GTTGCTTCTGCACTTCATGATAATTGTAGAGCTGTTCTTGTTGGAAAACGCACATATGGCAAGgtttatgaatattttccatcactgctgtatggtttaaacaatgtagactttgatctgcattctttgttctgaaaaccccatgtccatctgaaagcgtttt...
species | Glycine max |
transcript | GLYMA05G29820.1 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: TTCATGATAATTGTAGAGCTGTTCTTGTTGGAAAACGCACATATGGCAAG GGTCTAATCCAATCTGTATTTGAGCTTGATGATGGATCTGGTGTGGTTATCEST: gi|193555883|gb|FK516468.1|FK516468
genomic: TTCATGATAATTGTAGAGCTGTTCTTGTTGGAAAACGCACATATGGCAAGgtttatgaat ... gttctatcagGGTCTAATCCAATCTGTATTTGAGCTTGATGATGGATCTGGTGTGGTTATC
EST: TTCATGATAATTGTAGAGCTGTTCTTGTTGGAAAACGCACATATGGCAAG GGTCTAATCCAATCTGTATTTGAGCTTGATGATGGATCTGGTGTGGTTATCEST: gi|17021070|gb|BM092104.1|BM092104
genomic: TTCATGATAATTGTAGAGCTGTTCTTGTTGGAAAACGCACATATGGCAAGgtttatgaat ... gttctatcagGGTCTAATCCAATCTGTATTTGAGCTTGATGATGGATCTGGTGTGGTTATC
EST: TTCATGATAATTGTAGAGCTGTTCTTGTTGGAAAACGCACATATGGCAAG GGTCTAATCCAATCTGTATTTGAGCTTGATGATGGATCTGGTGTGGTTATCEST: gi|193674602|gb|FK616868.1|FK616868
genomic: TTCATGATAATTGTAGAGCTGTTCTTGTTGGAAAACGCACATATGGCAAGgtttatgaat ... gttctatcagGGTCTAATCCAATCTGTATTTGAGCTTGATGATGGATCTGGTGTGGTTATC
EST: TTCATGATAATTGTAGAGCTGTTCTTGTTGGAAAACGCACATATGGCAAG GGTCTAATCCAATCTGTATTTGAGCTTGATGATGGATCTGGTGTGGTTATCEST: gi|193687334|gb|FK633935.1|FK633935
genomic: TTCATGATAATTGTAGAGCTGTTCTTGTTGGAAAACGCACATATGGCAAGgtttatgaat ... gttctatcagGGTCTAATCCAATCTGTATTTGAGCTTGATGATGGATCTGGTGTGGTTATC
EST: TTCATGATAATTGTAGAGCTGTTCTTGTTGGAAAACGCACATATGGCAAG GGTCTAATCCAATCTGTATTTGAGCTTGATGATGGATCTGGTGTGGTTATC
genomic: TTCATGATAATTGTAGAGCTGTTCTTGTTGGAAAACGCACATATGGCAAGgtttatgaat ... gttctatcagGGTCTAATCCAATCTGTATTTGAGCTTGATGATGGATCTGGTGTGGTTATC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGCTTCTGCACTTCATGATAATTGTAGAGCTGTTCTTGTTGGAAAACGCACATATGGCAAGgtttatgaatattttccatcactgctgtatggtttaaacaatgtagactttgatctgcattctttgttctgaaaaccccatgtccatctgaaagcgtttt
- - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - GCTGTT