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GTGGAATGGACTGGCAATCTCATCTTTTGCCAGGGCTTCTAAGATTCTCAAGGGTGAAGCTGAAGGGACCAAATTCTACTTTCCTGTCATTGGCACTGAAgtaagttttctccctactagtatagcaattagaagttaagatgaatggctaccaatatttaaaaaagatgggagacactctttaatatttctggaagatg...
species | Glycine max |
transcript | GLYMA03G36910.1 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: AGGGTGAAGCTGAAGGGACCAAATTCTACTTTCCTGTCATTGGCACTGAA CCAAAGGAGTACATGGGAATTGCAGAAAAAGCAGCATCCTTTATTAGGAAGEST: gi|193387842|gb|FK355135.1|FK355135
genomic: AGGGTGAAGCTGAAGGGACCAAATTCTACTTTCCTGTCATTGGCACTGAAgtaagttttc ... catgctccagCCAAAGGAGTACATGGGAATTGCAGAAAAAGCAGCATCCTTTATTAGGAAG
EST: GAAGCTGAAGGGACCAAATTCTACTTTCCTGTCATTGGCACTGAA CCAAAGGAGTACATGGGAATTGCAGAAAAAGCAGCATCCTTTATTAGGAAGEST: gi|193355224|gb|FK320873.1|FK320873
genomic: GAAGCTGAAGGGACCAAATTCTACTTTCCTGTCATTGGCACTGAAgtaagttttc ... catgctccagCCAAAGGAGTACATGGGAATTGCAGAAAAAGCAGCATCCTTTATTAGGAAG
EST: GAAGCTGAAGGGACCTAAATTCTACTTTCCTGTCATTGGCACTGAA CCAAAGGAGTACATGGGAATTGCAGAAAAAGCAGCATCCTTTATTAGGAAG
genomic: GAAGCTGAAGGGACC-AAATTCTACTTTCCTGTCATTGGCACTGAAgtaagttttc ... catgctccagCCAAAGGAGTACATGGGAATTGCAGAAAAAGCAGCATCCTTTATTAGGAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGGAATGGACTGGCAATCTCATCTTTTGCCAGGGCTTCTAAGATTCTCAAGGGTGAAGCTGAAGGGACCAAATTCTACTTTCCTGTCATTGGCACTGAAgtaagttttctccctactagtatagcaattagaagttaagatgaatggctaccaatatttaaaaaagatgggagacactctttaatatttctggaagatg
- - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttctccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaaaaga